Streptomyces nigra: DC008_19415
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Entry
DC008_19415 CDS
T05839
Name
(GenBank) hypothetical protein
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
snz
Streptomyces nigra
Pathway
snz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DC008_19415
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snz01007
]
DC008_19415
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snz03016
]
DC008_19415
Enzymes [BR:
snz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
DC008_19415
Amino acid related enzymes [BR:
snz01007
]
Aminoacyl-tRNA synthetase
Class II (A)
DC008_19415
Transfer RNA biogenesis [BR:
snz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
DC008_19415
Prokaryotic type
Other AARSs
DC008_19415
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
DUF6410
Motif
Other DBs
NCBI-ProteinID:
AWE51640
LinkDB
All DBs
Position
complement(4185240..4187072)
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AA seq
610 aa
AA seq
DB search
MSGGVPRRPSRIRHLSGRLRPLLLGPRPEAVPLLVGRACALVGLLNVAAGVFPRFRHSRM
HALAEVLPGAFGPFAAALSLSAGVLLLLLAHGLRRGKRRAWRAAVVLLPAGAAAQFTYRH
SVIGVLISVWLLVTLLRHRDQFTALPDPRSRWRALANLVLMGAGSLALGLVIVSAHPGTL
LGDPSLADRISHVLYGMAGFEGPVDYRGSTSWTVAFSLGALGWITAVSTIYLAFRPEHPA
ARLTEDDESRLRALLARHGGRDSLGHFALRRDKAVVFSPSGKAAVTYRVVSGVMLASGDP
IGDVEAWPGAIERFMDEAKAHSWTPAVMGCSETGAEVWTRETGLDALELGDEAVVDVPDF
SLAGRAMRNVRQMVKRIERAGYETRVRRVRDLGDTELERVRRAAEDWRGTDTERGFSMAL
GRVGDPADGDCLIATAHKGDAEPGPYGDLKAVLHFVPWGTDGVSLDLMRRDRSADPGMNE
LLIVAALQAAPRLGIARVSLNFAMFRSALARGEKIGAGPVLRAWRGLLVFLSRWFQIESL
YKFNAKFQPRWEPRFVVYRASADLPRLGIAAMQAEGFVNLALPLPRFLRRRTTAPRPCPH
RVPEGDVRAA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtggggttccgcgacggccgagccggatacggcatctgtcgggccggctgcgg
ccgctgctgctggggccgcgccccgaggccgtcccgctcctcgtcggacgggcctgcgcc
ctggtcggactgctgaacgtcgccgcgggcgtgttcccgcgcttccggcacagccggatg
cacgccctcgccgaggtgctcccgggcgccttcgggccgttcgcggccgcgctgtcgctc
agcgccggcgtgctgttgctgctgctcgcgcacggcctgcggcgcggcaagcggcgcgcg
tggcgcgcggccgtcgtcctgctgcccgccggagcggcggcccagttcacctaccgccac
tccgtcatcggcgtcctcatctccgtctggctcctcgtcaccctgctgcgccaccgcgac
cagttcacggccctgcccgacccgcgcagccgctggcgcgccctcgccaacctcgtcctc
atgggcgccggttcgctcgccctcggcctcgtcatcgtcagcgcccacccgggcaccctg
ctcggcgacccgagcctggccgaccgcatcagccacgtcctgtacggcatggccggcttc
gagggcccggtcgactaccggggcagcacgtcctggaccgtcgccttctccctcggcgcg
ctcggctggatcaccgccgtgagcaccatctacctcgccttccggcccgaacacccggcc
gcccgtctcaccgaggacgacgagagccggctgcgtgccctgctggcccggcacggcggc
cgcgactccctcggccacttcgcgctgcgccgcgacaaggccgtcgtgttctcccccagc
ggcaaggccgcggtgacctaccgggtcgtctccggcgtgatgctcgccagcggcgacccc
atcggcgacgtcgaggcgtggcccggcgccatcgagcgcttcatggacgaggcgaaggcc
cactcctggaccccggccgtcatgggctgctccgagacgggcgccgaggtgtggacccgc
gagaccgggctcgacgccctcgaactgggcgacgaggcggtggtggacgtcccggatttc
tcgctcgccggccgcgcgatgcgcaatgtgcgccagatggtcaagcgcatcgagcgcgcc
ggttacgagacccgggtacgccgcgtccgtgacctcggcgacaccgagctggagcgggtg
cgccgcgccgccgaggactggcggggcaccgacaccgagcgcggcttctccatggccctc
ggccgggtcggcgaccccgccgacggcgactgcctcatcgccaccgctcacaagggcgac
gccgaaccgggcccctacggcgacctcaaggccgttctgcacttcgtgccctggggcacc
gacggcgtctccctggacctgatgcgccgcgaccgctccgccgaccccggcatgaacgaa
ctgctgatcgtggccgccctccaggccgcccccaggctcggcatcgcgcgcgtgtcgctg
aacttcgccatgttccgctcggcgctggcccgcggcgagaagatcggcgcgggccccgtc
ctgcgcgcctggcgcggcctgctggtcttcctctcgcgctggttccagatcgagtccctg
tacaagttcaacgcgaagttccagccccgctgggagccccggttcgtcgtctaccgcgcc
tccgcggacctcccgcgcctcggcatcgcggccatgcaggcggagggcttcgtgaacctg
gcgctgcccctgccgcgcttcctgcgccgccgcaccaccgccccgcgcccctgcccgcac
cgtgtccccgaaggggatgtccgggccgcctga
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