Streptomyces nigra: DC008_19595
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Entry
DC008_19595 CDS
T05839
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_19595
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DC008_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
Lon_C
AAA_22
DnaB_C
AAA_16
AAA
nSTAND3
AAA_14
DUF7125
ABC_tran
NACHT
PAXNEB
AAA_24
AAA_5
NTPase_1
DUF7129
AAA_30
AAA_29
MCM
RsgA_GTPase
MMR_HSR1
AAA_18
SLFN-g3_helicase
Rad51
RecA
DAP3
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
AWE51675
LinkDB
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Position
complement(4223073..4224482)
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AA seq
469 aa
AA seq
DB search
MAARTKSTKDRPSYRCTECGWQTAKWLGRCPECQAWGTVEEYGAPAVRTTAPGRVTSSAL
PIGEVDGRTATARSTGVPELDRVLGGGLVPGAVVLLAGEPGVGKSTLLLDVAAKSASDEH
RTLYVTGEESASQVRLRADRIHALDDHLYLAAETDLAAVLGHLDAVKPSLLILDSVQTVA
SPEIDGAPGGMAQVREVAGALIRASKERGMSTLLVGHVTKDGAIAGPRLLEHLVDVVLHF
EGDRHARLRLVRGVKNRYGATDEVGCFELHDEGIVGLTDPSGLFLTRRDEPVPGTCLTVT
LEGRRPLVAEVQALTVDSQIPSPRRTTSGLETSRVSMMLAVLEQRGRISALGKRDIYTAT
VGGVKLSEPAADLAVALALASAASDTPLPKNLVAIGEVGLAGEVRRVTGVQRRLAEAHRL
GFTHALVPNDPGKVPPGMKVLEVADMGDALRVLPRSRRREAPRDDEDRR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggctgcccgtaccaagtccaccaaggaccgcccgtcctaccgctgcaccgagtgcggc
tggcagacggccaagtggctcggccgctgccccgagtgccaggcgtgggggacggtcgag
gagtacggcgcacccgcggtccgtacgacggcgccgggccgggtcaccagctccgccctg
ccgatcggcgaggtcgacggccgtacggcgaccgcccgcagcaccggcgtgcccgagctg
gaccgggtcctcggcggcggcctggtgcccggcgcggtcgtcctccttgcgggcgagccc
ggcgtgggcaagtccaccctgctgctggacgtcgcggccaagtcggcgagcgacgagcac
cgcaccctctatgtgacgggcgaggagtcggccagccaggtgcggctgcgcgccgaccgc
atccacgccctcgacgaccatctgtacctcgcggccgagaccgatctcgcggccgtcctc
gggcacttggacgcggtgaagccgtccctgctcatcctcgactcggtgcagacggtggcc
tcccccgagatcgacggcgcccccggcggcatggcccaggtccgcgaggtggccggcgcc
ctgatccgcgcctccaaggagcgcggcatgtcgaccctgctcgtgggccatgtcaccaag
gacggcgccatcgccggtccacgcctcctggagcacctggtcgacgtggtgctccacttc
gagggcgaccggcacgcgcgcctgcgcctcgtacgcggcgtcaagaaccgctacggggcg
acggacgaggtcggctgcttcgagctgcacgacgagggcatcgtgggactgaccgacccc
agcggcctcttcctgacccgccgcgacgagccggtcccgggcacctgcctgacggtcacc
ctggagggccgccgccccctggtcgccgaggtccaggcgctcaccgtcgactcccagatc
ccctccccgcgccgtacgacgtccggtctggagacctcgcgggtctcgatgatgctggcc
gtgctggagcagcgcggccggatcagcgccctcggcaagcgggacatctacaccgcgacg
gtcggcggggtgaagctgtccgagcccgccgcggacctcgcggtggccctcgcgctggcc
tccgccgcgagtgacacacctctccccaagaacttggtcgcgatcggcgaggtgggcctc
gcgggcgaggtcagacgggtcacgggcgtgcagcgcaggctcgccgaggcccaccgtctg
ggcttcacgcacgccctggtcccgaacgacccggggaaggtcccgccgggcatgaaggtg
ctggaagtggccgatatgggagacgccctcagggtccttccgcgctcgcgtcggcgagag
gccccacgggacgacgaggaccgccggtag
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