Streptomyces nigra: DC008_20110
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Entry
DC008_20110 CDS
T05839
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snz
Streptomyces nigra
Pathway
snz00061
Fatty acid biosynthesis
snz00071
Fatty acid degradation
snz01100
Metabolic pathways
snz01212
Fatty acid metabolism
snz02024
Quorum sensing
snz04146
Peroxisome
Module
snz_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DC008_20110
00071 Fatty acid degradation
DC008_20110
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DC008_20110
09145 Cellular community - prokaryotes
02024 Quorum sensing
DC008_20110
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snz01004
]
DC008_20110
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snz04147
]
DC008_20110
Enzymes [BR:
snz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DC008_20110
Lipid biosynthesis proteins [BR:
snz01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DC008_20110
Exosome [BR:
snz04147
]
Exosomal proteins
Exosomal proteins of breast milk
DC008_20110
Exosomal proteins of breast cancer cells
DC008_20110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AWE51766
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Position
4324049..4325977
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AA seq
642 aa
AA seq
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MSTPLPSFAPSAAYDDAPGPTLVRPETRRLNGAVREAYVPPFAPPVTHGSLADLPFDNAD
AVPDAVVLSRRDDDGNWTDVTAAEFAGQVQAVAKGLIGEGLMPGDRIAVMARTRYEWTLL
DFAAWAAGLVVVPIYPTSSVFQTRWILQDSGAVALITETVAQANALGPELDRVPDLRSLW
VMDKGHVDRLAEAGEEVSDGEVAVRRGMLVPDTLATLIYTSGTTGRPKGCALTHGNFFAE
VDNAVELLYPIFKARTSEEASVLLFLPMSHVFGRMVAVACVRARVRLGHAPSLKAEDLLP
DLAAFRPTCLLTIPYMLEKVYNSARAKAEAGGRASTFDRAARVAERWGEAQEARQSGTGP
GPGTALKAARAMYDPLVYRRIRNAMGGRVKYAICGGSPLGRRLASFYAGAGIEVYEGYGL
TETTGAATVTPPLQPRLGTVGWPLPGTRVRIAADGEILLSGEHVLRGYWDPAAGGVVPAA
ADGWLATGDIGALDDEGYLTITGRKKELLITAGGKSVAPAPLENWLRSHPLISQCLVVGD
RRPYVAALITLDMDGVTHWRRMNGRHPVPAELLLDDPELRDILGRAVDEANKLVSRPESI
RRFAVLPVDFTELDGHLTPSMKLRRDAIMRDFAADVEALYAG
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
gtgtccaccccgcttccctccttcgccccctcggccgcctacgacgacgctccgggcccg
accctggtgcgaccggagacccggcggctgaacggcgccgtacgggaggcgtacgtaccg
ccgttcgccccgcccgtgacccacggctcgctggccgacctgcctttcgacaacgccgac
gcggtgccggacgcggtggtcctcagccgccgggacgacgacgggaactggacggacgtc
acggcggcggagttcgccgggcaggtgcaggccgtcgcgaaggggctcatcggcgagggg
ctgatgcccggcgaccggatcgccgtcatggcccgcacccgctacgagtggaccctcctc
gacttcgccgcctgggccgccggactggtggtggtccccatctaccccacctcctccgtc
ttccagacccgctggatcctccaggactccggtgccgtcgccctcatcaccgagaccgtc
gcccaggcgaacgccctcggcccggaactggaccgcgtccccgacctgcgcagcctgtgg
gtgatggacaaggggcacgtcgaccggctggcggaggccggggaggaggtgtccgacggt
gaggtggccgtccggcggggcatgctcgtgcccgacaccctggccaccctgatctacacc
tcgggcaccaccggccggcccaagggctgcgcgctgacccacggcaacttcttcgccgag
gtcgacaacgccgtcgaactgctctacccgatcttcaaggcgcggaccagcgaagaggcg
tcggtgctgctcttcctgccgatgtcccatgtgttcgggcggatggtggcggtggcctgt
gtgcgcgcccgggtccggctgggccacgcgccgagcctgaaggccgaggacctgctgccg
gacctcgccgccttccggccgacctgtctgctgaccatcccgtacatgctggagaaggtc
tacaactccgcccgcgccaaggcggaggcgggcggccgggcgtccaccttcgaccgggcc
gcgcgcgtcgccgagcgctggggcgaggcgcaggaggcccgccagtccggcaccggcccc
ggcccgggaaccgcgctcaaggcggcccgcgcgatgtacgacccgctcgtctaccggcgg
atccgcaacgcgatgggcggcagggtcaagtacgcgatctgcggcggctccccgctgggc
cgccggctcgcctccttctacgcgggcgccggcatcgaggtctacgagggctacggcctc
accgagacgaccggcgcggccaccgtgacgccgcccctccaaccccgcctcggcacggtc
ggctggccgctgcccggcacccgcgtccggatcgccgcggacggcgagatcctgctctcc
ggcgagcacgtgctgcgcggctactgggacccggcggccggcggtgtggtccccgcggcc
gccgacggatggctggccaccggcgacatcggtgccctggacgacgagggctatctgacg
atcaccggccgcaagaaggaactcctcatcaccgcgggcggcaagagcgtcgccccggcc
ccgctggagaactggctgcgctcccacccgctgatctcgcagtgcctggtcgtcggcgac
cgccgcccgtacgtcgccgcgctgatcaccctcgacatggacggcgtcacccactggcgc
cggatgaacggccggcacccggtccccgccgaactcctcctggacgacccggagctgcgg
gacatcctcgggcgcgccgtggacgaggcgaacaagctggtctcccggcccgagtcgatc
cgccgcttcgccgtcctgccggtggacttcaccgagctggacggccacctcacaccgtcg
atgaagctccgcagggacgcgatcatgcgggacttcgccgccgacgtggaggccctgtac
gccggctga
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