Streptomyces nigra: DC008_21135
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Entry
DC008_21135 CDS
T05839
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
snz
Streptomyces nigra
Pathway
snz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DC008_21135 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snz03019
]
DC008_21135 (groL)
03110 Chaperones and folding catalysts [BR:
snz03110
]
DC008_21135 (groL)
03029 Mitochondrial biogenesis [BR:
snz03029
]
DC008_21135 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snz04147
]
DC008_21135 (groL)
Enzymes [BR:
snz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
DC008_21135 (groL)
Messenger RNA biogenesis [BR:
snz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
DC008_21135 (groL)
Chaperones and folding catalysts [BR:
snz03110
]
Heat shock proteins
HSP60 / Chaperonin
DC008_21135 (groL)
Mitochondrial biogenesis [BR:
snz03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
DC008_21135 (groL)
Exosome [BR:
snz04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DC008_21135 (groL)
Exosomal proteins of other body fluids (saliva and urine)
DC008_21135 (groL)
Exosomal proteins of breast cancer cells
DC008_21135 (groL)
Exosomal proteins of colorectal cancer cells
DC008_21135 (groL)
Exosomal proteins of bladder cancer cells
DC008_21135 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-ProteinID:
AWE51943
LinkDB
All DBs
Position
4519195..4520820
Genome browser
AA seq
541 aa
AA seq
DB search
MAKILKFDEDARRALERGVNKLADTVKVTIGPKGRNVVIDKKFGAPTITNDGVTIAREVE
VEDPYENLGAQLVKEVATKTNDIAGDGTTTATVLAQALVREGLKNVAAGASPAALKKGID
AAVAAVSEELLATARPIDEKSDIAAVAGLSAQDQQVGELIAEAMDKVGKDGVITVEESNT
FGLELDFTEGMAFDKGYLSPYFVTDQERMEAVLEDPYILINQGKISSIADLLPLLEKVIQ
TNSSKPLLIIAEDVEGEALSTLVVNKIRGTFNAVAVKAPGFGDRRKAMLQDMATLTGATV
ISEEVGLKLDQVGIDVLGSARRVTVTKDDTTIVDGAGKSEDVQGRVAQIKSEIENTDSDW
DREKLQERLAKLAGGVCVIKVGAATEVELKEKKHRLEDAISATRAAVEEGIVSGGGSALV
HAVKVLEGNLGKTGDEATGVAVVRKAAVEPLRWIAENAGLEGYVITSKVAELDKGQGFNA
ATGEYGDLVKAGVIDPVKVTRSALENAASIASLLLTTETLVVEKKEEEEPAAAGHSHGHA
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcctgaagttcgacgaggacgcccgtcgcgccctcgagcgcggcgtcaac
aagcttgccgacacggtcaaggtgacgatcggccccaagggccgcaacgtcgtcatcgac
aagaagttcggcgcccccaccatcaccaacgacggcgtgaccatcgcccgtgaggtcgag
gtcgaggacccgtacgagaacctcggtgcccagctggtgaaggaggtggcgaccaagacc
aacgacatcgcgggtgacggcaccaccaccgccaccgtgctcgcccaggcgctcgtgcgc
gagggcctgaagaacgtcgccgccggcgcctccccggccgccctgaagaagggcatcgac
gcggccgtcgcggccgtctccgaggagctcctcgcgaccgcgcgcccgatcgacgagaag
tccgacatcgccgccgtcgccggtctgtccgcccaggaccagcaggtcggcgagctcatc
gccgaggcgatggacaaggtcggcaaggacggtgtcatcaccgtcgaggagtccaacacc
ttcggtcttgagctggacttcaccgagggcatggccttcgacaagggctacctgtccccg
tacttcgtgacggaccaggagcgcatggaggccgtcctggaggacccgtacatcctcatc
aaccagggcaagatctcctccatcgccgacctgctgccgctgctggagaaggtcatccag
accaactcctccaagccgctgctgatcatcgccgaggacgtcgagggcgaggccctgtcg
accctggtcgtgaacaagatccgcggcaccttcaacgcggtcgcggtcaaggccccgggc
ttcggtgaccgccgcaaggcgatgctgcaggacatggcgaccctcaccggcgccaccgtc
atctccgaggaggtcggcctcaagctcgaccaggtcggcatcgacgtgctgggctccgcc
cgccgcgtcaccgtcaccaaggacgacaccaccatcgtcgacggcgccggcaagtccgag
gacgtccagggccgcgtcgcccagatcaagtccgagatcgagaacaccgactccgactgg
gaccgcgagaagctccaggagcgcctcgcgaagctggccggcggcgtgtgcgtgatcaag
gtcggcgccgccaccgaggtggagctgaaggagaagaagcaccgtctggaggacgccatc
tccgcgacccgcgccgcggtcgaggagggcatcgtctccggtggtggctccgcgctcgtc
cacgccgtgaaggtcctcgagggcaacctcggcaagaccggcgacgaggccaccggtgtc
gccgtggtccgcaaggccgccgtcgagccgctgcgctggatcgccgagaacgccggcctc
gagggctacgtcatcacctcgaaggtcgccgagctcgacaagggccagggcttcaacgcc
gccaccggcgagtacggcgacctggtcaaggccggcgtcatcgacccggtcaaggtcacc
cgttccgccctggagaacgccgcctccatcgcctccctcctcctcacgaccgagaccctg
gtcgtcgagaagaaggaagaggaagagccggccgccgcaggccacagccacggccacgcc
cactag
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