Streptomyces nigra: DC008_21370
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Entry
DC008_21370 CDS
T05839
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
snz
Streptomyces nigra
Pathway
snz00020
Citrate cycle (TCA cycle)
snz00640
Propanoate metabolism
snz00660
C5-Branched dibasic acid metabolism
snz00720
Other carbon fixation pathways
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01120
Microbial metabolism in diverse environments
snz01200
Carbon metabolism
Module
snz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DC008_21370
00640 Propanoate metabolism
DC008_21370
00660 C5-Branched dibasic acid metabolism
DC008_21370
09102 Energy metabolism
00720 Other carbon fixation pathways
DC008_21370
Enzymes [BR:
snz01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DC008_21370
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
BBMV_Gp1_N
Motif
Other DBs
NCBI-ProteinID:
AWE51986
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All DBs
Position
4582028..4583209
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AA seq
393 aa
AA seq
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MDLFEYQARDLFAKHDVPVLAGEVIDTPEAARAATERLGGKSVVKAQVKVGGRGKAGGVK
LAATPDEAVARATDILGMDIKGHTVHKVMIAETAPEILEEYYVSFLLDRANRTFLSIASV
EGGMEIEEVAATRPEAVAKIAIDAIDGVDEAKAREIVEAAKFPAEVADKVANVLIKLWDT
FIKSDALLVEVNPLAKVASGEVLALDGKVSLDDNAEFRHPEYEELHDKAAANPLEAAAKE
KNLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPANFLDIGGGASAQVMANGL
EIILGDPDVKSVFVNVFGGITACDEVANGIVQALKLLEDRGENVSKPLVVRLDGNNAELG
RQILTDANHPLVQRVDTMDGAADKAAELAHAAK
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgttcgagtaccaggcgagggacctcttcgccaagcacgatgtaccggtgctg
gccggtgaagtcatcgacacgcctgaggcggcccgcgcagccactgagcgtctcggtggc
aagtccgtcgtcaaggcccaggtgaaggtcggtggccgcggcaaggccggcggcgtgaag
ctcgccgcgaccccggacgaggccgtcgcccgcgcgacggacatcctcggcatggacatc
aagggccacacggtccacaaggtgatgatcgccgagacggccccggagatcctggaggag
tactacgtctccttcctcctcgaccgtgccaaccgcaccttcctctccatcgcgtccgtc
gagggcggcatggagatcgaggaggtggcggccacccgtccggaggccgtcgccaagatc
gcgatcgacgccatcgacggcgtggacgaggccaaggcccgcgagatcgtcgaggctgcc
aagttcccggccgaggtcgcggacaaggtcgccaacgtcctgatcaagctgtgggacacc
ttcatcaagtcggacgccctcctcgtcgaggtcaacccgctcgcgaaggtcgcctccggc
gaggtcctcgccctggacggcaaggtgtcgctcgacgacaacgccgagttccgtcacccc
gagtacgaggagctccacgacaaggccgcggcgaacccgctcgaggccgccgccaaggag
aagaacctcaactacgtcaagctcgacggcgaggtcggcatcatcggcaacggcgcgggt
ctcgtcatgagcaccctggacgtcgtcgcctacgccggtgagaagcacggcaacgtcaag
ccggccaacttcctggacatcggcggtggcgcctccgcccaggtcatggccaacggcctc
gagatcatcctcggcgacccggacgtcaagtccgtcttcgtcaacgtcttcggtggcatc
accgcctgtgacgaggtcgccaacggcatcgtccaggccctgaagctgctcgaggaccgc
ggcgagaacgtcagcaagccgctcgtcgtccgcctcgacggcaacaacgccgagctcggc
cggcagatcctcaccgacgccaaccacccgctggtccagcgcgtcgacaccatggacggc
gcggccgacaaggccgccgagctggcccacgccgccaagtaa
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