Streptomyces nigra: DC008_21660
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Entry
DC008_21660 CDS
T05839
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
snz
Streptomyces nigra
Pathway
snz00020
Citrate cycle (TCA cycle)
snz00190
Oxidative phosphorylation
snz00650
Butanoate metabolism
snz00720
Other carbon fixation pathways
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01120
Microbial metabolism in diverse environments
snz01200
Carbon metabolism
Module
snz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snz_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
snz_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DC008_21660
00650 Butanoate metabolism
DC008_21660
09102 Energy metabolism
00190 Oxidative phosphorylation
DC008_21660
00720 Other carbon fixation pathways
DC008_21660
Enzymes [BR:
snz01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
DC008_21660
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Thi4
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
AWE52034
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Position
complement(4644725..4646479)
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AA seq
584 aa
AA seq
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MKIHKYDTVIVGAGGAGMRAAIESTKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDSVLDLEKMGLPFNRTPNGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKHGVEFYNEFYVLDQLITEVDGVKKSAGV
VAYELATGEIHVFQAKAVIYASGGTGKFFKVTSNAHTLTGDGQAAVYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPEGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYAMGGIP
TNVEGEVLADNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRAGIAAAEYSQK
ADFVELPENPAELVLEQVERLRTSTGTERVATIRRELQETMDANVMVFRTEQTIKTAVEK
IAELRERYKNVSIQDKGKRFNTDLLEAIELGNLLDLAEVMAVSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGDDGTESIRLDYKPVVQTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgccggtggcgcgggtatgcgcgcg
gccatcgagtcgacgaagcgcagccgcaccgccgtgctgaccaagctgtaccccacccgc
tcccacacgggcgccgcgcagggcggcatggccgccgcgctcgccaacgtggaggaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgccgagatcctggcgaaggaggccatcgactccgtcctcgacctggagaagatgggc
ctgccgttcaaccgcaccccgaacggcaccatcgaccagcgccgcttcggcggtcacagc
cgcaaccacggcgaggccccggtccgccggtcctgctacgccgcggaccgcaccggccac
atgatcctccagacgctgtaccagaactgcgtcaagcacggcgtggagttctacaacgag
ttctacgtcctggaccagctgatcaccgaggtcgacggcgtcaagaagtcggccggtgtg
gtcgcctacgagctggccaccggcgagatccacgtcttccaggcgaaggccgtcatctac
gcgtccggcggcaccggcaagttcttcaaggtgacgtccaacgcgcacaccctgaccggt
gacggccaggccgccgtgtaccggcgcggtctgccgctggaggacatggagttcttccag
ttccacccgaccggcatctggcgcatgggcatcctgctgacggagggcgcccgcggtgag
ggcggcatcctccgcaacaaggacggcgagcgcttcatggagaagtacgcgccggtcatg
aaggacctcgcctcgcgtgacgtcgtctcgcgctccatctacacggagatccgcgagggc
cgcggctgcggtcccgagggcgaccacgtctacctggacctcacgcacctcccgccggag
cagctggacgccaagctcccggacatcacggagttcgcgcggacctacctcggcatcgag
ccctacacggacccgatcccgatccagccgaccgcgcactacgccatgggcggcatcccg
accaacgtcgagggtgaggtcctggcggacaacaccaccgtcgtcccgggcctgtacgcc
gccggcgaggtcgcctgcgtgtccgtgcacggcgccaaccgcctcggcaccaactcgctg
ctggacatcaacgtgttcggcaagcgggcgggcatcgccgccgccgagtactcccagaag
gccgacttcgtcgagctgccggagaacccggccgagctggtgctcgagcaggtcgagcgg
ctgcgcacctccaccggcaccgagcgggtggccaccatccgcagggagctgcaggagacc
atggacgccaacgtcatggtgttccgcacggagcagaccatcaagacggcggtcgagaag
atcgcggagctgcgcgagcgctacaagaacgtctcgatccaggacaagggcaagcggttc
aacacggacctgctggaggccatcgagctgggcaacctgctcgacctggccgaggtcatg
gcggtctccgcgctggcccgcaaggagtcccgcggcggtcactaccgcgaggactacccg
aaccgcgacgacgtcaacttcatgcgccacaccatggcgtaccgcgaggtgggcgacgac
ggcacggagtccattcgtctcgactacaagccggtcgtccagacccgctaccagccgatg
gagcgtaagtactga
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