Streptomyces nigra: DC008_22420
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Entry
DC008_22420 CDS
T05839
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
snz
Streptomyces nigra
Pathway
snz00550
Peptidoglycan biosynthesis
snz01100
Metabolic pathways
snz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
DC008_22420
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DC008_22420
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snz01003
]
DC008_22420
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
DC008_22420
Enzymes [BR:
snz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
DC008_22420
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
DC008_22420
Glycosyltransferases [BR:
snz01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
DC008_22420
Peptidoglycan biosynthesis and degradation proteins [BR:
snz01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
DC008_22420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
DUF4106
SMC_Nse1
Motif
Other DBs
NCBI-ProteinID:
AWE52174
LinkDB
All DBs
Position
4806051..4808438
Genome browser
AA seq
795 aa
AA seq
DB search
MGRAEERRARGRSGHRAAPRRSSGVPPRTGDDGPTVVGTPSESGGGRAAARRAAKGAGRD
GKGRIRRLFTWKKILGTFLGTCLLAIGSFIALYLYVDVPGDNAAAQAAQRQSNVYKYSDG
SVLARAGDVNREIVDLSKVPKKVQYTFVAAENKSFYNDHGIDLKGTARGLLNTAMGKGAQ
GGSTITQQYVKNYYLSQEQTVSRKLKEMVISLKVDRQMTKDDILAGYINTSYYGRGAYGI
QAAAQAYYRVDAEKLTVEQGAYLAALLQAPSQYDWSSASDTGKKLVTNRWNYVLDNMVEE
GWLKRSERQEMTKLPVPREPKPAAGREGQKGYLIELANRQLEDQLMEQQGLTRSQAEAAV
VDQGWTITLNVDKKRQAALEKAVKAELTARLDPKKRKVDKNIQAGAVSVDPKTGKIVALY
GGEDYFKHYTSNATRADYQPASTFKPVILAAALENAAQTQDGDPITADTVYDGTSKRPVV
DGGAKVGFAPENEDDQDYGDITVQTAMNKSVNSVFAQMGVDVGMKDVMAVAGALGMDTED
AQAVPAQTLGTMGASPLQMAGVYATLDNHGVKVTPGILKEAEHNTRKVEIPDPVGERVIS
RRAADTVTSVLTGVVDDGTARQAVANNPKRSGQKVAGKTGTSDDNKSAWFTGYTPDLVTS
VGLFGEDAKTHAQTKMYGAGGFDRVNGGGFPAKIWASYMFGVTRPDARFSLQTDQGAGVR
PTWTPTPSQTPTTEEPTDEPTTEEPSDEPTTQEPTDEPTTQEPTDEPTTQKPTTDPTGRP
TGGITLDPARPDDED
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggacgagcggaagagagacgagcgcgcgggcgcagtggccaccgcgccgcgccccgg
cgctcctccggggtgcccccgcgcaccggggacgacgggccgacggtcgtcggcacaccg
tccgagtccggcggaggccgcgccgccgcccgccgtgccgccaagggcgccggccgcgac
ggcaagggccggatacgccggctgttcacctggaagaagatcctcgggaccttcctgggc
acctgcctgctcgccatcggctccttcatcgcgctctacctgtacgtcgacgtccccggc
gacaacgccgccgcccaggccgcgcagcgccagagcaacgtctacaagtacagcgacggc
agcgtcctcgcccgcgccggcgacgtgaaccgcgagatcgtcgacctgtccaaggtcccg
aagaaggtccagtacacgttcgtcgccgccgagaacaagagcttctacaacgaccacggc
atcgacctgaagggcaccgcccgcggtctgctcaacaccgcgatgggcaagggcgcgcag
ggcggctcgaccatcacccagcagtacgtcaagaactactacctgagccaggagcagacg
gtcagccgcaagctcaaggagatggtcatctccctgaaggtcgaccgccagatgaccaag
gacgacatcctcgccggctacatcaacaccagctactacggccgcggcgcctacggcatc
caggccgccgcccaggcgtactaccgcgtcgacgccgagaagctgaccgtcgagcagggc
gcctacctcgccgccctcctccaggcgcccagccagtacgactggtcgagcgcgtccgac
accggcaagaagctcgtcaccaaccgctggaactacgtcctcgacaacatggtcgaggaa
ggctggctgaagcgctccgaacgccaggagatgaccaagctgccggtgcccagggagccc
aagcccgccgcgggccgcgagggccagaagggctatctgatcgagctggccaaccgtcag
ctcgaggaccagctgatggagcagcagggcctcacccgctcccaggccgaggccgccgtc
gtcgaccagggctggaccatcaccctcaacgtcgacaagaagcggcaggccgcgctggag
aaggccgtcaaggccgaactcaccgcccggctcgacccgaagaagcgcaaggtcgacaag
aacatccaggccggcgccgtctccgtcgaccccaagaccgggaagatcgtcgccctctac
ggcggcgaggactacttcaagcactacacgagcaacgccacccgcgccgactaccagccc
gcctccaccttcaagccggtgatcctcgcggccgctctggagaacgccgcacagacccag
gacggcgacccgatcaccgccgacacggtctacgacggcaccagcaagcgcccggtcgtc
gacggcggcgccaaggtcggcttcgccccggagaacgaggacgaccaggactacggcgac
atcaccgtgcagacggcgatgaacaagtccgtcaactccgtcttcgcgcagatgggcgtc
gacgtcggcatgaaggacgtcatggccgtcgccggcgcgctcggcatggacaccgaggac
gcccaggccgtacccgcccagaccctgggcaccatgggcgccagcccgctccagatggcc
ggcgtgtacgccaccctcgacaaccacggcgtgaaggtcacccccggcatcctcaaggag
gccgagcacaacacccgcaaggtcgagatccccgaccccgtcggcgagcgcgtcatctcc
cgccgcgccgcggacaccgtcacctccgtcctcaccggcgtggtcgacgacggcaccgcc
cgccaggccgtggcgaacaaccccaagcgcagcgggcagaaggtcgccggcaagaccggc
acctccgacgacaacaagtccgcctggttcaccggctacacgcccgacctggtcacctcc
gtcggcctgttcggcgaggacgccaagacccacgcccagaccaagatgtacggcgccggc
ggcttcgaccgcgtcaacggcggcggcttcccggcgaagatctgggcctcgtacatgttc
ggcgtgaccaggcccgacgcgcggttcagcctccagaccgaccagggcgccggggtccgg
cccacctggacgccgacgccgtcgcagacgccgaccaccgaggaaccgaccgacgagccc
accaccgaggaaccgtcggacgagcccacgacccaggaaccgaccgacgaacccaccacg
caggaaccgacggacgagccgaccacccagaagcccacgaccgaccccacgggccggccc
acgggcggcatcaccctggacccggcccgccccgacgacgaggactag
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