Streptomyces nigra: DC008_22590
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Entry
DC008_22590 CDS
T05839
Name
(GenBank) hypothetical protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
snz
Streptomyces nigra
Pathway
snz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DC008_22590
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
snz02000
]
DC008_22590
Transporters [BR:
snz02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
DC008_22590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AWE52204
LinkDB
All DBs
Position
4844857..4847010
Genome browser
AA seq
717 aa
AA seq
DB search
MSHDGVGTRPGRGSVMRAAAFLTAGVLALPVLSGCSDPDPAGKPLAGQDIAPAARARIAD
GGTLRWAVDTVPETLNTFQSDADATTSRIAQATLPSMYRLDESGRPERNEAYLESAKVVE
TEPKQVVLYKLNQQAVWSDGREIGAADFAAQWRALSGKDSAYWTARNAGYDRIQKIERGD
NDLEVRVTFARPYADWQSLFSPLYPKEVMGTPDSFNDGARRKLKVSAGPFTVRKIDRKGD
EIRLTRNPRWWGEPAKLNEIVLRAVPRDERAAELAAGRLDLADVDPAAARRIAIAAPRPE
NPSAGPSGTPLMGPDLRKLTSVQRKDKERFHGFEVRKSLEPAYTQLALNGGGDGPLADER
VRRAVARALDREKIAETVLRPLGLPAEPVGSHLALSGQAAYADNSGAIGGQDTAEAQALL
ADAGWVPGGPVKEKKKGEKAAGSEADKTGKKEGGKEEEKDSESKTDKKTDKKSDDGTYIV
GDDNKGADEQDSRPLAQDGKQYGGKQLSGGAPGAYAPQGTAAPAAATRQLAKDGKALTLR
FVVPDGEGSGTLRTVADRIGHMLKRVGIRTEITKVSDESYFKDHIASGQYDLALYSWPAS
AFPATDARPIYAKPVPAADGSLNVEQNYTRVGTDQVDQLFEQAVSTLDESESRSLIRKAD
SRIWAAAGSIPLYQRPQLTAARSNLANAGAFGFGAPVFEDMGFLKKGAAGQPAPSAS
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatgacggtgtcggaaccaggcccggccgcggctcggtcatgcgcgcggccgcc
ttcctcaccgcgggagtgctggcgctgccggtgctctccggctgcagcgacccggacccg
gcgggcaagccgctggccggccaggacatcgccccggccgcccgggcgcggatcgccgac
ggcggcaccctgcgctgggcggtcgacaccgtgccggagacgctgaacaccttccagtcg
gacgccgacgccaccacgtcccggatcgcccaggccacgctgccctcgatgtaccggctc
gacgagagcgggcgccccgagcgcaacgaggcgtatctggagtccgccaaggtcgtcgag
accgagcccaagcaggtcgtgctgtacaagctcaaccagcaggccgtctggagcgacggc
cgggagatcggcgccgccgacttcgccgcccagtggcgggcgctgtccggcaaggacagc
gcctactggaccgcccgcaacgccggctacgaccgcatccagaagatcgaacgcggcgac
aacgacctggaggtgcgggtcaccttcgcccgcccctacgccgactggcagtcgctgttc
tcgccgctgtacccgaaggaggtcatgggcacgccggactccttcaacgacggggcgcgg
cgcaagctcaaggtcagcgccggcccgttcaccgtgcgcaagatcgaccgcaagggcgac
gagatccggctcacccgcaatccccgctggtggggcgagcccgccaagctgaacgagatc
gtgctgcgcgccgtcccccgcgacgagcgggccgccgaactggccgccggacgcctcgac
ctcgccgacgtcgacccggccgccgcccggcgcatcgcgatcgccgccccgcgccccgag
aacccctcggccggcccgtccggcaccccgctgatgggccccgacctgcgcaagctgacc
tccgtgcagcgcaaggacaaggagcggttccacggcttcgaggtccgcaagtccctcgag
cccgcctacacccagctcgccctcaacggcggcggcgacggcccgctcgccgacgagcgg
gtgcgccgggccgtggcccgcgccctggaccgggagaagatcgccgaaacggtcctgcgg
ccgctcggactgcccgccgagccggtcggcagccacctcgcgctgtccggacaggccgcg
tacgccgacaacagcggggcgatcggcggccaggacaccgccgaggcacaggccctcctc
gcggacgccggctgggtgccgggcggccccgtgaaggagaagaagaagggggagaaggcc
gccggcagcgaggccgacaagaccggcaagaaggagggagggaaggaggaggagaaggac
tccgagtcgaagacggacaagaagacggacaagaagtccgacgacggcacctacatcgtc
ggcgacgacaacaagggtgccgacgagcaggacagccggccgctcgcccaggacggcaag
cagtacggcggcaagcagctgtccggcggggcgcccggcgcgtacgccccgcagggcacg
gccgctcccgccgccgcgacccggcagctcgccaaggacggcaaggcgctgacactgcgg
ttcgtcgtgccggacggcgaggggtcggggaccctgcgcacggtggcggaccggatcggc
cacatgctgaagcgggtcggcatccgcaccgagatcaccaaggtctcggacgagagctac
ttcaaggaccacatcgcgtccggccagtacgacctcgccctctactcctggccggcctcc
gccttccccgcgaccgacgcccggccgatctacgccaagccggtcccggccgccgacggc
tccctgaacgtcgagcagaactacacccgggtcggcaccgaccaggtcgaccagctcttc
gagcaggcggtcagcacactcgacgagtccgagtcccgctccctgatccgcaaggcggac
tcccgtatctgggccgcggccggctcgatccccctctaccagcgtccccagctgacggcc
gcgcgcagcaacctcgccaacgccggcgccttcgggttcggcgccccggtcttcgaggac
atgggcttcctgaagaagggtgccgcgggccagccggccccctcggcgtcgtag
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