KEGG   Streptomyces nigra: DC008_23305
Entry
DC008_23305       CDS       T05839                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03090  RNA polymerase sigma-B factor
Organism
snz  Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:snz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snz03021]
    DC008_23305
Transcription machinery [BR:snz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DC008_23305
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r4_2 HTH_23 DUF7343 Sigma70_ECF HTH_24 MarR_2 NirdL-like_HTH MarR IF2_N HTH_3 HTH_Crp_2 GerE HTH_AraC
Other DBs
NCBI-ProteinID: AWE52332
LinkDB
Position
complement(5000364..5001512)
AA seq 382 aa
MRDGDGPVRDEERGTRELPDGTSPCSDGAGSLGAGPSGPSGSRRMADGIDGIPEQARPHP
EDDSVATGLLADGRDDDGAVQGTPPAGRIGVSPARPAARARERATGTMSEHERYAEERPT
SARGAQATRHDPQDRSGARALFVELRGLQDGTPEYAELRNRLVRMHLPLVEHLARRFRNR
GEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQ
ELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDE
SPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQ
MHVSRLLARTLAQLREKLLVEE
NT seq 1149 nt   +upstreamnt  +downstreamnt
gtgagggacggggacgggccggtgcgggacgaagagcgcggcacacgggagctgccggac
ggcacctccccctgctccgacggagccgggagcctgggggcgggcccgagcggcccgagc
ggttcccgccgcatggcggacggcatcgacggcatccccgagcaggcccggccgcacccg
gaggacgactccgtggcgaccggcctcctggccgacgggcgggatgacgacggtgccgtg
cagggcacgcccccggccgggcgcatcggggtctccccggcccggccggcggcgagggct
cgggagagggcgacggggacgatgagcgagcacgagcggtacgccgaggaacggccgacg
agcgcacgcggcgcgcaggcgacacgccacgacccgcaggaccgcagcggggcgcgcgcc
ctgttcgtcgagctgcgcggcctgcaggacggcaccccggagtacgcggagctgcgcaac
cggctggtccggatgcatctgcccctcgtggagcacctcgcgcgccgcttccgcaatcgc
ggcgagccgctcgacgacctcacccaggtcgccaccatcgggctgatcaagtcggtcgac
cggttcgacccggaccgcggtgtggagttctcgacgtacgcgactccgacggtcgtcggc
gagatcaagcggcacttccgggacaagggctgggcggtgcgcgtcccgcgcaggctgcag
gagctgcgcctcgcgctgacgacggccaccgccgagctgtcccagctgcacggccgctcc
cccaccgtccacgagctcgccgagaagctggcgatctcggaggaggaggtcctggagggc
ctggagtcggccaacgcctactcgacgctgtcgctggacgtccccgacaccgacgacgag
tccccggcggtcgcggacaccctgggcgcggaggacgaggcgctggagggcgtcgagtac
cgcgagtcgctcaagccgctgctggaggatctcccgccgcgcgagaaacgcatcctgctg
ctgcgcttcttcggcaacatgacccagtcgcagatcgcgcaggaggtcggcatctcgcag
atgcacgtctcccggctgctggcgcgcacgctggcgcagctgcgggagaagctgctggtc
gaggagtga

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