Streptomyces nigra: DC008_23305
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Entry
DC008_23305 CDS
T05839
Name
(GenBank) RNA polymerase subunit sigma-70
KO
K03090
RNA polymerase sigma-B factor
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snz03021
]
DC008_23305
Transcription machinery [BR:
snz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DC008_23305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
DUF7343
Sigma70_ECF
HTH_24
MarR_2
NirdL-like_HTH
MarR
IF2_N
HTH_3
HTH_Crp_2
GerE
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AWE52332
LinkDB
All DBs
Position
complement(5000364..5001512)
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AA seq
382 aa
AA seq
DB search
MRDGDGPVRDEERGTRELPDGTSPCSDGAGSLGAGPSGPSGSRRMADGIDGIPEQARPHP
EDDSVATGLLADGRDDDGAVQGTPPAGRIGVSPARPAARARERATGTMSEHERYAEERPT
SARGAQATRHDPQDRSGARALFVELRGLQDGTPEYAELRNRLVRMHLPLVEHLARRFRNR
GEPLDDLTQVATIGLIKSVDRFDPDRGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQ
ELRLALTTATAELSQLHGRSPTVHELAEKLAISEEEVLEGLESANAYSTLSLDVPDTDDE
SPAVADTLGAEDEALEGVEYRESLKPLLEDLPPREKRILLLRFFGNMTQSQIAQEVGISQ
MHVSRLLARTLAQLREKLLVEE
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
gtgagggacggggacgggccggtgcgggacgaagagcgcggcacacgggagctgccggac
ggcacctccccctgctccgacggagccgggagcctgggggcgggcccgagcggcccgagc
ggttcccgccgcatggcggacggcatcgacggcatccccgagcaggcccggccgcacccg
gaggacgactccgtggcgaccggcctcctggccgacgggcgggatgacgacggtgccgtg
cagggcacgcccccggccgggcgcatcggggtctccccggcccggccggcggcgagggct
cgggagagggcgacggggacgatgagcgagcacgagcggtacgccgaggaacggccgacg
agcgcacgcggcgcgcaggcgacacgccacgacccgcaggaccgcagcggggcgcgcgcc
ctgttcgtcgagctgcgcggcctgcaggacggcaccccggagtacgcggagctgcgcaac
cggctggtccggatgcatctgcccctcgtggagcacctcgcgcgccgcttccgcaatcgc
ggcgagccgctcgacgacctcacccaggtcgccaccatcgggctgatcaagtcggtcgac
cggttcgacccggaccgcggtgtggagttctcgacgtacgcgactccgacggtcgtcggc
gagatcaagcggcacttccgggacaagggctgggcggtgcgcgtcccgcgcaggctgcag
gagctgcgcctcgcgctgacgacggccaccgccgagctgtcccagctgcacggccgctcc
cccaccgtccacgagctcgccgagaagctggcgatctcggaggaggaggtcctggagggc
ctggagtcggccaacgcctactcgacgctgtcgctggacgtccccgacaccgacgacgag
tccccggcggtcgcggacaccctgggcgcggaggacgaggcgctggagggcgtcgagtac
cgcgagtcgctcaagccgctgctggaggatctcccgccgcgcgagaaacgcatcctgctg
ctgcgcttcttcggcaacatgacccagtcgcagatcgcgcaggaggtcggcatctcgcag
atgcacgtctcccggctgctggcgcgcacgctggcgcagctgcgggagaagctgctggtc
gaggagtga
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