Streptomyces nigra: DC008_23905
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Entry
DC008_23905 CDS
T05839
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
snz
Streptomyces nigra
Pathway
snz00300
Lysine biosynthesis
snz00470
D-Amino acid metabolism
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01120
Microbial metabolism in diverse environments
snz01230
Biosynthesis of amino acids
Module
snz_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DC008_23905 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DC008_23905 (lysA)
Enzymes [BR:
snz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
DC008_23905 (lysA)
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Paralog
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
APS_kinase
Motif
Other DBs
NCBI-ProteinID:
AWE52433
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All DBs
Position
5116056..5117447
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AA seq
463 aa
AA seq
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MSRSAHPAGPRHADVLTEGHYSAPPADLNALDPKVWARTVTRGDDGVVTVGGVDVKTLAE
QHGTPAYVLDESDFRARARAWRDAFGTDADVFYAGKAFLSRAVVRWLHEEGLNLDVCSGG
ELTTALSAGMPAERIAFHGNNKSVAEIRRAVEAGVGRIVLDSFQEIVRVAHIAHELGTRQ
RVQIRITVGVEAHTHEFIATAHEDQKFGIPLAGGQAAEAVRRALQLDGLDVIGIHSHIGS
QIFDMSGFEVAAHRVVGLLKDIRDEHGVELPEIDLGGGLGIAYTSDDDPREPHEIAKALT
EIVTRECEAAKLRTPRISVEPGRAIVGPTAFTLYEVGTIKPLDGLRTYVSVDGGMSDNIR
TALYDAEYSVALVSRSSDAEPMLARVVGKHCESGDIVVKDAFLPADLAPGDLIAVPATGA
YCRSMASNYNHVLRPPVLAVRDGASREIVRRETEEDLLRLDVG
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagccgttccgcacatcccgccgggccccgtcacgccgacgtcctgaccgaggggcac
tactcggccccgcccgcggacctcaacgccctcgaccccaaggtgtgggcccggaccgtc
acccggggcgatgacggggtcgtcaccgtcggcggggtcgacgtcaagaccctggccgaa
cagcacggcacccccgcctacgtcctcgacgagagcgacttccgggcccgggcccgcgcc
tggcgcgacgccttcgggaccgacgccgacgtcttctacgcgggcaaggcgttcctgtcc
cgtgccgtcgtgcggtggctgcacgaggaggggctcaacctcgacgtctgctccggcggc
gagctcaccaccgcgctgtccgccgggatgcccgccgagcgcatcgccttccacggcaac
aacaagtccgtcgccgagatccgccgggccgtcgaggcgggagtcgggcggatcgtgctc
gactcgttccaggagatcgtccgggtcgctcatatcgcccatgagctcggcacgcggcag
cgcgtgcagatccgcatcaccgtcggcgtcgaggcgcacacccacgagttcatcgccacc
gcccacgaggaccagaagttcggcatcccgctcgccggcgggcaggccgccgaggccgtg
cggcgggcgctgcagctcgacgggctcgacgtcatcggcatccactcccacatcgggtcg
cagatcttcgacatgtccgggttcgaggtcgccgcgcaccgcgtggtcgggctgctgaag
gacatccgcgacgagcacggcgtcgagcttcccgagatcgacctcggcggcgggctcggg
atcgcgtacacgagtgacgacgatccccgtgagccgcacgagatcgccaaggcgctcacc
gagatcgtcacccgggagtgtgaggccgcgaagctccgcacgccgcggatcagcgtggag
ccggggcgcgccatcgtcgggccgaccgcgttcacgctctacgaggtcgggaccatcaag
ccgctcgacgggctgcgcacgtacgtctccgtcgacggcgggatgtcggacaacatccgc
accgccctgtacgacgccgagtacagcgtcgccctcgtctcccgctcctccgacgccgag
cccatgctcgcccgcgtcgtcggcaagcactgtgagagcggggacatcgtggtcaaggac
gcgttcctgccggccgacctggcgccgggggacctcatcgccgtaccggcgacgggcgcc
tactgccgttccatggccagcaactacaaccacgtgctgcggccgccggtcctcgccgtg
cgggacggcgcctcccgggagatcgtccggcgtgagacggaggaggacctcctccgtctc
gacgtcggctga
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