Streptomyces nigra: DC008_24470
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Entry
DC008_24470 CDS
T05839
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme GlgX
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
snz
Streptomyces nigra
Pathway
snz00500
Starch and sucrose metabolism
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
DC008_24470 (glgX)
Enzymes [BR:
snz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
DC008_24470 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AWE52539
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Position
complement(5250845..5253097)
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AA seq
750 aa
AA seq
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MSSAAEQEAVAGAVAAEEGRPAVLNGARGRAPGVPVRPGAPVPLGARFRVGPDGVAGTNF
ALWAGGAEAVELCLFDERGKETRAKLTELTHEIWHGFVPGVMPGQRYGYRVHGRWDPWTG
ARWNPAKLLLDPYARAVDGDFTLPPEVYGHVRDWPQQHVADTVRDERDSAPYVPKGVVVH
DDAPDDEWQDDRRPKTPWADSVIYELHVRGFTKLHPGIPEELRGTYAGLAHPAAIEHLAK
LGVTAVELLPVHQFAHEDHLLRRGLRNYWGYNSIGYFAPHAAYAASGTTGQQVGEFRRMV
RALHAAGIEVILDVVYNHTAEAGELGPTLSLKGVDNRGYYRLQADARRYADYTGCGNTLH
VVQPQVLRLITDSLRYWVTEMGVDGFRFDLAAALARSMHDVDMLSPFLAVIAQDPVLRRV
KLIAEPWDIGSGGYQVGAFPPLWTEWNDRYRDAVRDFWRGALPDVRDLGYRLSGSSDLYA
WGGRRPYASVNFVTAHDGFTLRDMVSYEHKHNEANGEGNRDGSNDNRSWNCGAEGGTDDE
DVLALRRRQLRNLLSTLLLSTGVPMLVAGDEMGRTQRGNNNAYCQDNEISWLDWALLEEP
GWKALFELTSRLIALRHRHPVLRRRAFFSGRPHSADGLRDLAWFTARGTEMTEADWYAPA
ATLGMYLSGRDIPGRDERGAQIVDDSFLVVLHTGHRPVDFVLPGTPWARRYEVVVDTSRE
EQAREPGAEHPAGTEISVPGRTVLLLRVAG
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgagcgcagccgagcaggaggcggtggccggggcggtcgccgctgaggaggggcgc
ccggccgtgctgaacggggcgcgcggcagggccccgggggtccccgtgcggccgggggcg
ccggtgccgctcggcgcccgcttccgggtcgggccggacggggtggcgggcaccaacttc
gcgctgtgggcgggcggggcggaggccgtggagctgtgcctgttcgacgagcggggcaag
gagacccgcgccaagctgaccgaactgacgcatgagatctggcacggcttcgtaccgggc
gtgatgcccggccagcgctacggctaccgggtgcacggccgctgggacccgtggaccggc
gcccgctggaacccggcgaagctgctcctcgacccgtacgcgcgcgcggtggacggcgac
ttcaccctgccgcccgaggtgtacgggcacgtccgggactggccgcagcagcatgtcgcg
gacaccgtgcgcgacgagcgggactcggcgccgtacgtccccaagggcgtggtcgtgcac
gacgacgcgcccgacgacgagtggcaggacgaccgccgccccaagacgccgtgggccgac
tcggtcatctacgagctgcatgtgcgcggcttcaccaagctgcaccccggcattcccgag
gagctgcgcggcacctacgccgggctggcgcaccccgcggcgatcgagcacttggcgaaa
ctgggggtgacggcggtggagctgctgccggtgcaccagttcgcgcacgaggaccatctg
ctgcgccgcggtctgcgcaactactggggctacaactcgatcggctacttcgccccgcac
gccgcgtacgccgcctcggggacgaccggccagcaggtcggggagttccggcggatggtg
cgcgccctgcacgcggccgggatcgaggtcatcctcgacgtcgtctacaaccacacggcg
gaggcgggcgagctgggcccgacgctgtcgctgaagggcgtcgacaaccgcggctactac
cggctgcaggcggacgcccgccgctacgccgactacacgggctgcgggaacaccctgcac
gtcgtccagccgcaggtgctgcggctcatcaccgactcgctgcggtactgggtgacggag
atgggcgtggacggcttccggttcgacctggccgccgcgctggcccgctcgatgcacgac
gtcgacatgctgtcgccgttcctcgccgtgatcgcgcaggacccggtgctgcggcgggtg
aaactgatcgcggagccgtgggacatcggctcgggcggctaccaggtgggtgccttccct
cccctgtggacggagtggaacgaccgctaccgggacgcagtgcgggacttctggcgcggt
gccctgccggatgtgcgggacctcgggtaccggctgtcggggtcgagcgacctgtacgcg
tggggcgggcgcaggccgtacgcgtcggtgaacttcgtgaccgcgcacgacggcttcacc
ctgcgggacatggtgagttacgagcacaagcacaacgaggcgaacggcgagggcaaccgg
gacggctccaacgacaaccggtcctggaactgcggcgccgagggcgggacggacgacgag
gacgtcctggccctgcgccgccgccagctgcggaacctgctgtccacgctgctgctgtcg
acgggcgtgccgatgctggtcgcgggcgacgagatggggcgcacccagcgcggcaacaac
aacgcctactgccaggacaacgagatcagctggctggactgggcgctgctggaggagccg
ggctggaaggcgctgttcgagctgacctcgcggctgatcgcgctgcgccaccggcacccg
gtgctgcgccggagggcgttcttctcgggccggccgcactcggccgacggactgcgggac
ctggcctggttcaccgcgcgcggcaccgagatgacggaggccgactggtacgcgccggcc
gcgacgctgggcatgtatctgtccgggcgggacatcccgggccgggacgagcggggtgcg
cagatcgtcgacgacagcttcctcgtggtcctgcacaccgggcaccggccggtggacttc
gtgctgccggggacgccgtgggcgcggcggtacgaggtggtcgtcgacacctcccgggag
gagcaggcacgggagccgggcgcggagcatccggccggcacggagatcagcgtgccggga
cggaccgtgctgctgctgcgggtggcgggctga
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