Streptomyces nigra: DC008_24970
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Entry
DC008_24970 CDS
T05839
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snz03032
]
DC008_24970
03036 Chromosome and associated proteins [BR:
snz03036
]
DC008_24970
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_24970
DNA replication proteins [BR:
snz03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
DC008_24970
Chromosome and associated proteins [BR:
snz03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
DC008_24970
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
DC008_24970
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
AWE52626
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All DBs
Position
5359953..5360606
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AA seq
217 aa
AA seq
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MNKAQLVEAIADKMGGRQQAADAVDHVLDAIVRAVVAGERVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPRGGEVSVKKAPKGSLSGGASATVKK
AAAKKTTKAAAKKTTGAAKKTTAKKTTATAKKTAAKKAPAKKTTTAAAKKTTAKKTTATA
KKTAAKKAPAKKATAKKAPAKKSTARKTTAKATARKR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagcgattgccgacaagatgggcggccgccagcaggcc
gccgatgctgtcgaccacgtactggacgccatcgtccgcgccgtcgtggcgggggagcgg
gtgtcggtcaccggcttcggttcgttcgagaaggtcgaccgcccggcccggtacgcccgc
aaccctcagacgggcgagcgggttcgggtcaagaagacctcggttccccgcttccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctgccgcgcggcggagaggtc
tccgtgaagaaggcgcccaagggcagcctgtccggcggtgcctcggccacggtcaagaag
gccgccgccaagaagaccaccaaggccgccgcgaagaagacgacgggcgccgccaagaag
acgacggcgaagaagaccaccgcgaccgcgaagaagacggctgcgaagaaggcgcccgcg
aagaagacgacgacggccgccgcgaagaagacgacggcgaagaagaccaccgcgaccgcg
aagaagacggccgcgaagaaggctccggccaagaaggccaccgccaagaaggcgcccgcc
aagaagtcgacggctcgcaagaccaccgccaaggcgaccgcccgcaagaggtag
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