Streptomyces nigra: DC008_25125
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Entry
DC008_25125 CDS
T05839
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snz03036
]
DC008_25125 (smc)
Chromosome and associated proteins [BR:
snz03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
DC008_25125 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AWE52655
LinkDB
All DBs
Position
5386989..5390543
Genome browser
AA seq
1184 aa
AA seq
DB search
MHLKALTLRGFKSFASATTLRFEPGITCVVGPNGSGKSNVVDALSWVMGEQGAKSLRGGK
MEDVIFAGTTGRPPLGRAEVSLTIDNSDGALPIEYAEVTITRIMFRNGGSEYQINGDTCR
LLDIQELLSDSGIGREMHVIVGQGQLDSVLHADPMGRRAFIEEAAGVLKHRKRKEKALRK
LDAMQANLARVQDLTEELRRQLKPLGRQAAVARRAAVIQADLRDARLRLLADDLVRLREA
LNAEVADEAALKARKEAAEQELRKALQREALLEDEVRRLAPRLQRAQQTWYELSQLAERV
RGTISLADARVKSATSAPPEERRGRDPEDMEREAARIREQEAELEAALEAAERALENTVE
HRAELERELAVEERRLKDVARAIADRREGLARLNGQVNAARSRAASAQAEIDRLAAARDE
AQERAVAAQEEYEALKAEVDGLDAGDAELGERHETAKRQLAEAEAALTAAREAATAAERR
RAATQARHEALAMGLRRKDGTGALLGARDRLTGLLGPAAELLTVAPGHEVALAAAFGSAA
DAVAVTSPAAAAEAIRLLRKQDAGRASLLPAGAPAPDPTSGPAPAGRYAADLVTGPAELM
PAVRRLLRAIVVVGTLEDAEDLVYAHPELTAVTAEGDLLGAHFAHGGSAGAPSLLEVQAS
VDEAAAELDELAVRCEELTEAQHAAAERRRECAALVEELGERRRAADREKSAVAQQLGRL
AGQARGAAGEAERSAAAAARAQEALDKALQEVEELAERLAVAEEMPVEEEPDTSVRDRLA
ADGANARQTEMEARLQVRTHEERVKGLAGRADSLDRAARAEREARARAEQRRARLRHEAA
VAEAVASGARQLLAHVEVSLGRAEQERAAAEAAKARREQELAAARTEGRDLKAELDNLTD
SVHRGEVLGAEKRLRIEQLETKALEELGVEPAGLVSEYGPDQLVPPSLPAEGEQLPEDPD
HPRNRPKPFVRAEQEKRLKSAERAYQQLGKVNPLALEEFAALEERHQFLSEQLEDLRKTR
ADLLQVVKEVDERVEQVFTEAYRDTAREFEGVFSRLFPGGEGRLVLTDPDNMLTTGVDVE
ARPPGKKVKRLSLLSGGERSLTAVALLVSIFKARPSPFYVMDEVEAALDDTNLQRLIRIM
QELQEASQLIVITHQKRTMEVADALYGVSMQGDGVSKVISQRLR
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
gtgcacctcaaggccctgaccctccgagggttcaagtcgttcgcctcggcgaccacgctc
cggttcgagccggggatcacgtgtgtcgtcggaccgaacggctcgggcaagtccaacgtc
gtggacgcgctcagctgggtcatgggcgagcagggcgccaagtcgctgcgcggcggaaag
atggaggacgtcatcttcgccggcaccaccggccgccccccgctgggccgcgccgaggtg
tccctgaccatcgacaactccgacggggcgctgcccatcgagtacgccgaggtcaccatc
acgcggatcatgttccgcaacggcggcagcgagtaccagatcaacggcgacacctgccgc
ctcctcgacatccaggagctcctctccgactccggtatcggccgcgagatgcacgtcatc
gtcggccagggccagctcgactccgtgctgcacgccgatccgatgggccgccgcgccttc
atcgaggaggcggccggcgtcctcaagcaccgcaagcgcaaggagaaagcgctccgcaag
ctggacgcgatgcaggccaacctcgcgcgcgtgcaggacctcaccgaggagctccgccgc
cagctcaagcccctcggccgccaggccgccgtcgcccgccgggccgccgtcatccaggcc
gacctgcgcgacgcccgactgcgcctgctcgccgacgatctcgtacggctgcgggaggcg
ctgaacgccgaggtcgccgacgaggccgcgctcaaggcccgcaaagaggccgccgagcag
gagctgaggaaggcgctccagcgcgaggcgctcctggaggacgaggtgcgccggctcgcc
ccgcgcctccagcgggcccagcagacctggtacgaactgtcccagctcgccgagcgcgta
cgcggcacgatctcgctggccgacgcccgggtgaagagcgcgacctccgcgccgcccgag
gagcgccggggccgcgaccccgaggacatggagcgggaggccgcccggatccgcgagcag
gaggcggagctggaggcggccctcgaggcggccgaacgcgccctggagaacacggtcgag
caccgcgccgaactggagcgcgagctcgccgtcgaggagcgccgtctgaaggacgtcgcc
cgcgccatcgccgaccgccgtgaaggtctcgcccggctgaacggccaggtcaacgcggcc
cgctcacgcgccgcctccgcgcaggccgagatcgaccggctggccgccgcccgcgacgag
gcgcaggagcgggccgtcgccgcccaggaggagtacgaggccctgaaggccgaggtcgac
ggcctggacgccggtgacgccgaactcggcgagcggcacgagacggccaagcggcagctc
gccgaggcggaggccgcgctgaccgccgcccgcgaggccgccaccgccgccgaacgccga
cgcgccgcgacccaggcccgccacgaggccctggccatgggtctgcgccgcaaggacggc
accggtgccctgctgggggcgcgggaccgcctgaccggtctgctcggaccggcggcggaa
ctgctgaccgtggcaccgggacacgaggtggcgctcgccgccgcgttcgggtcagcggcg
gacgcggtcgcggtgacgtccccggcggccgccgccgaggccatccggctgctgcgcaag
caggacgccggccgcgcctcgctcctgcccgccggcgccccggcgccagacccgacttcg
ggtccggctcccgcgggccggtacgcagccgacctggtcaccggtcccgccgagctcatg
cccgccgtacgacgcctgctgcgcgcgatcgtggtcgtcggcaccctggaggacgccgag
gacctggtctacgcccaccccgagctgaccgcggtcaccgccgagggcgatctcctcggc
gcccacttcgcgcacggcggctccgccggcgcgcccagtctgctggaggtgcaggcctcc
gtcgacgaggccgccgccgagctggacgagctggccgtacggtgcgaggaactgaccgag
gcgcagcacgcggccgccgaacggcggcgggagtgcgctgcgctcgtcgaggagctgggg
gagcggcgccgggccgccgaccgggagaagtccgccgtcgcccagcagctcggccggctc
gccgggcaggcgcgcggtgccgccggggaggccgagcggtccgcggccgccgccgcccgc
gcccaggaggcgctcgacaaggcgctccaggaggtcgaggagctggcggaacggctcgcc
gtcgccgaggagatgccggtcgaggaggaaccggacacctccgtgcgcgaccggctcgcc
gccgacggcgccaacgcgcggcagaccgagatggaggcccgcctccaggtccgtacgcac
gaggaacgggtcaagggactcgccgggcgggccgactcgctggaccgggccgcccgcgcc
gaacgcgaggcacgcgcgcgtgccgaacagcgacgggcgcggctgcggcacgaggcggcc
gtcgccgaggccgtcgcgtccggcgcccggcagctcctcgcccatgtcgaggtctcgctg
ggccgcgccgagcaggagcgcgccgccgccgaggccgcgaaggcccgccgcgagcaggag
ctggcggccgcccgcaccgagggccgcgatctgaaggcggagctggacaatctcaccgac
tccgtgcaccgcggcgaggtcctgggcgccgagaagcggctgcggatcgagcagctggag
accaaggccctggaggagctgggcgtggagccggcggggctggtctccgagtacggcccc
gaccagctcgtaccgccgtcgctgcccgccgagggggagcagctcccggaggaccccgac
catccgcgcaaccggcccaagccgttcgtgcgggccgagcaggagaagcggctgaagtcc
gccgagcgggcctaccagcagctcggcaaggtcaacccgctcgcgttggaggagttcgcg
gcgctggaggagcggcaccagttcctcagcgagcagctggaggacctgcgcaagacccgc
gccgatctgctccaggtggtcaaggaggtcgacgagcgcgtcgagcaggtcttcaccgag
gcgtaccgggacaccgcacgcgagttcgagggcgtcttcagccggctcttcccgggcggt
gagggacggctggtcctgaccgaccccgacaacatgctcaccaccggtgtggacgtcgag
gcccgcccgcccggcaagaaggtcaagcgtctgtccctgctctccggcggtgagcgctcg
ctgacggcggtcgccctgctggtgtcgatcttcaaggcccggccgagcccgttctacgtc
atggacgaggtcgaggccgccctcgacgacaccaacctccagcggctcatccggatcatg
caggagctgcaggaggcctcccagctcatcgtgatcacgcaccagaagcgcacgatggag
gtcgccgacgccctgtacggcgtctccatgcagggcgacggtgtgtcgaaggtcatcagc
cagcggctgcgctga
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