Streptomyces nigra: DC008_25930
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Entry
DC008_25930 CDS
T05839
Name
(GenBank) hybrid sensor histidine kinase/response regulator
Organism
snz
Streptomyces nigra
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
Response_reg
HATPase_c
HisKA
GAF_2
GAF
ATG17_like
DUF4795
OKR_DC_1_N
HAUS-augmin3
Med21
bHLH-MYC_N
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
AWE52790
LinkDB
All DBs
Position
5581246..5586720
Genome browser
AA seq
1824 aa
AA seq
DB search
MESGAATRGTKTRAKGGQSLRSERKSRGGTTAVDTAALNRLMAALVSMRDGNFRKRLTVS
GDGVMSEIAAVFNEVADRNLHLTGELARVRRMVGREGKLTERLETGACEGSWAVAIDNSN
ALVDDLVRPVSEVGRVLSAVAEGDLSPRMELRTQAPDGTGHPLRGEFLKVGRTVNNLVDQ
LSTFTDEVTRVASEVGTEGKLGGQARVRGMSGSWKDLTDSVNTMAYRLTAQVRDIALVTT
AVAKGDLSRKVTVHVAGEMLELKNTVNTMVDQLSSFSSEVTRVAREVGTEGELGGQAQVP
GVAGVWKDLTDSVNLMAGNLTAQVRGISQVTTAVANGDLSQKVTVSARGEVAQLADTINQ
MTETLRIFADEVTRVANEVGAEGQLGGQANVPGAAGTWKDLTDSVNTVFRNLTIQVRDIA
AVTTAVASGDLSQKVTVDVAGEMLELKNTVNGMVDQLSSFGSEVTRVAREVGVEGELGGQ
AQVPGAAGTWKDLTDSVNTAFRNLTGQVRNIAQVTTAVANGDLSQKVTVDVSGEMLQLKN
TVNTMVDQLSSFADQVTRMARDVGTEGRLGGQAVVPGVSGTWKELTDSVNFMAGNLTSQV
RQIAQVTTAVARGDLSQKIDVDARGEILELKNTINTMVDQLSGFADQVTRVAREVGTEGR
LGGQAQVPGVAGVWRDLTDSVNGMAGNLTAQVRNIAQVATAVARGDLSQKITVDARGEIL
ELKNTLNTMVDQLSSFAEEVTRVAREVGTEGELGGQAEVQGVSGTWKDLTQSVNFMANNL
TIQVRQIAEVTTAVAKGDLSKKITVDAKGEILELVTTVNTMVDQLSSFAEQVTRVAREVG
TEGILGGQAHVPGVTGIWKDLSGNVNLMAKNLTMQVRNISQVAAAVANGDLTRTVTIEAR
GEVAQLADTFNTMVKTLSSFADQVTKVAREVGTDGILGGQAHVPGVAGTWKDLTESVNQM
ASNLTGQVRNIAMVTTAIAKGDLTKKIDIDARGEILELKTTINTMVDQLSSFAEEVTRVA
REVGTEGQLGGQARVRDVDGTWRDLTESVNEMAGNLTRQVRAIARVATAVTRGDLNLKID
VDASGEIQELQDYINKMIANLRDTTIANKEQDWLKGNLARISALMQGRRDLEDVASLIMS
ELTPVVSAQHGAFFLAMPLVDGKDISAEGEDQYELRMLGSYAYSMGSMPTSFRPGEGLIG
TAALEKRAILVENAPSGYLKISSGLGEAPPAQVIVLPVLFEGKVLGVIELASFTPFTQIQ
KDFLNQIAEMIATSVNTISVNTKTEVLLRQSQELTEQLRERSEELENRQKALQASNAELE
EKAELLAQQNRDIEVKNTEIEEARQVLEERAEQLAVSMRYKSEFLANMSHELRTPLNSLL
ILAKLLADNAEGNLSPKQVEFAETIHGAGSDLLQLINDILDLSKVEAGKMDVSPTRIALV
QLVDYVEATFRPLTAEKGLDLSVRVSPELPATLHTDEQRLLQVLRNLLSNAVKFTDSGSV
ELVIRPAGSDVPPSIREQLLEAGSLTEADAPLIAFSVTDTGIGIAASKMRVIFEAFKQAD
GTTSRKYGGTGLGLSISREIAQLLGGEIHAQSEPGRGSTFTLYLPLHPSELPPQGYQQQL
PPLDPGDLVASAADLSELSDAEIETPAEVRSYRETQNGAAALFRRRRRAAELEQRPTQPE
LRPAVAEEGPSARSRRGIRFGGEKVLIVDDDIRNVFALTSVLEQHGLSVLYAENGREGIE
VLEQHDDVAVVLMDIMMPEMDGYATTTAIRRMPQFAGLPIIALTAKAMKGDREKAIESGA
SDYVTKPVDPDHLLTVMNQWMREQ
NT seq
5475 nt
NT seq
+upstream
nt +downstream
nt
gtggagtctggcgcagcgacgcggggcacgaagacgcgcgcgaaaggcggacagtccctg
aggagcgaacgcaagagccgcggcggtaccaccgccgtggacacggcggccctgaaccgc
ctgatggcggccctggtgtcgatgcgcgacgggaacttccgcaagcggctcacggtgtcc
ggcgacggcgtgatgtcggagatcgcggccgtcttcaacgaggtggccgaccgcaatctc
cacctcacgggtgagctggctcgcgtgcgccggatggtcggccgggagggcaagctgacc
gagcggctggagaccggggcctgtgagggctcctgggcggtcgcgatcgacaactcgaac
gcgctggtggacgacctggtccggccggtctccgaggtcgggcgggtgctgtcggcggtc
gccgagggtgatctgtcgccgcggatggagctgcggacgcaggccccggacggcacgggg
catccgctgcggggcgagttcctgaaggtcggccgcaccgtcaacaatctcgtcgaccag
ctgtcgacgttcaccgacgaggtcacgcgtgtggccagcgaggtgggcacggagggcaag
ctcggcgggcaggcgcgggtgcgcggtatgtccgggtcctggaaggacctgacggactcc
gtgaacaccatggcgtaccggctgaccgcgcaggtgcgggacatcgcgctggtgacgacg
gcggtggccaagggcgatctgtcgcgcaaggtcacggtgcatgtggccggcgagatgctg
gagctgaagaacaccgtcaacacgatggtggaccagctgtcgtcgttctcgtccgaggtg
acgcgcgtcgcccgcgaggtgggcaccgagggtgagctcggcggccaggcgcaggtgccc
ggtgtggcgggtgtgtggaaggacctcaccgattcggtgaacctgatggctgggaacctg
acggcccaggtgcggggtatctcacaggtgacgacggcggtcgccaacggtgatctgtcg
cagaaggtgacggtgtcggcgcggggcgaggtcgcccagctcgcggacacgatcaaccag
atgaccgagacgctgcggatcttcgcggacgaggtcacgcgcgtggccaacgaggtcggc
gcggaggggcagctcggcggtcaggcgaatgtgccgggcgcggccggcacctggaaggac
ctgacggactccgtcaacacggtgttccggaatctgaccattcaggtgagggacatcgcg
gccgtcacgaccgcggtggccagtggtgacctctcgcagaaggtcacggtcgacgtggcc
ggcgagatgctggagctgaagaacaccgtcaacgggatggtggaccagctgtcgtcgttc
ggcagcgaggtgacccgggtcgcccgtgaggtcggtgtcgagggtgagctgggcggccag
gcgcaggtgccgggggccgcggggacgtggaaggacctgacggactccgtcaacacggcg
ttccggaacctcaccgggcaggtgaggaacatcgcgcaggtgacgacggcggtcgccaac
ggcgatctgtcgcagaaggtcacggtggacgtctccggtgagatgctccagctgaagaac
accgtgaacacgatggtggaccagctgtcgtcgttcgcggaccaggtgacgcggatggcc
cgggacgtgggtacggagggccgcctgggcggtcaggccgtcgtaccgggggtgtcgggc
acctggaaggagctcacggactccgtcaacttcatggccgggaacctgacgtcgcaggtg
cggcagatcgcccaggtgacgacggcggtggcgcgcggtgacctgtcgcagaagatcgac
gtggacgcgcgcggggagatcctcgagctgaagaacaccatcaacacgatggtcgaccag
ctgtccggcttcgccgaccaggtgacccgggtggcccgtgaggtgggcaccgagggccgg
ctcggcggtcaggcgcaggtgcccggtgtcgccggtgtgtggcgggatctcacggactcc
gtgaacggcatggccggcaacctcacggcccaggtgcgcaacatcgcgcaggtcgcgacg
gcggtggcgcgcggtgacctctcgcagaagatcaccgtggacgcgcgcggggagatcctg
gagctgaagaacacgctgaacacgatggtggaccagctgtcgtcgttcgcggaggaggtc
accagggtcgcccgcgaggtgggcaccgagggtgagctgggcggtcaggccgaggtgcag
ggtgtctccggcacctggaaggacctcacgcagtccgtgaacttcatggcgaacaacctg
accatccaggtgcgccagatcgccgaggtcacgacggcggtcgccaagggcgatctgtcg
aagaagatcaccgtcgacgccaagggcgagatcctcgaactggtgacgacggtgaacacg
atggtggaccagctgtcgtcgttcgccgagcaggtgacccgggtggcccgtgaggtgggc
accgagggcatcctgggcggtcaggcgcacgtcccgggtgtcacgggcatctggaaggac
ctcagcggcaatgtgaacctgatggcgaagaacctcaccatgcaggtgcggaacatctcg
caggtcgcggccgccgtcgccaacggcgatctgacgcggacggtgacgatcgaggcgcgc
ggcgaggtcgcgcagctcgcggacaccttcaacacgatggtgaagacgctgagttcgttc
gccgaccaggtcaccaaggtggcccgtgaggtgggcacggacggcatcctgggcggtcag
gcgcacgttccgggcgtggccggcacctggaaggacctcaccgagtccgtgaaccagatg
gcgtcgaacctgaccggtcaggtccgcaacatcgccatggtcacgaccgccatcgccaag
ggcgacctgacgaagaagatcgacatcgacgcccggggcgagatcctggagctgaagacc
acgatcaacacgatggtcgaccagctgtcgtcgttcgccgaggaggtcacccgcgtcgcc
cgcgaggtgggcaccgaggggcagctcggcggccaggcacgcgtacgtgacgtcgacggc
acctggcgggacctgaccgagtccgtgaacgagatggccgggaacctgacccggcaggtg
cgcgccatcgcgcgcgtggcgaccgcggtgacccgcggcgacctgaacctgaagatcgac
gtcgacgcgtccggcgagatccaggagctgcaggactacatcaacaagatgatcgccaac
ctgcgcgacaccacgatcgccaacaaggagcaggactggctcaagggcaacctcgcccgg
atctcggcgctgatgcagggccgccgggacctggaggacgtggcctcgctgatcatgagc
gagctgacgccggtcgtctcggcgcagcacggcgcgttcttcctggcgatgcccctggtg
gacggcaaggacatcagcgccgagggcgaggaccagtacgagctgcggatgctggggtcg
tacgcctactcgatggggtcgatgccgacctcgttccggcccggcgaggggctgatcggg
acggccgccctggagaagcgcgcgatcctggtggagaacgcgcccagcggctatctgaag
atctcctccgggctcggtgaggcgccgcccgcgcaggtgatcgtgctgccggtgctgttc
gagggcaaggtgctcggtgtgatcgagctggcctcgttcacaccgttcacgcagatccag
aaggacttcctcaaccagatcgccgagatgatcgcgaccagcgtcaacaccatctcggtc
aacaccaagaccgaggtgctgctgcggcagtcgcaggagctgaccgagcaactgcgggag
cggtcggaggagttggagaaccggcagaaggccctccaggcgtccaacgccgaactggag
gagaaggccgagctgctggcccagcagaaccgcgacatcgaggtgaagaacaccgagatc
gaggaggcgcggcaggtcctggaggagcgcgccgagcagctcgcggtgtcgatgcgctac
aagagcgagttcctcgccaacatgtcgcacgagctgcgcacgccgctcaactcgctgctg
atcctggcgaagctgctcgccgacaacgccgaggggaacctctcgccgaagcaggtcgag
ttcgccgaaacgatccacggtgccggttccgacctgctccagctgatcaacgacatcttg
gacctgtcgaaggtcgaggcgggcaagatggacgtctcgccgacacggatcgcgctcgtc
cagctcgtcgactacgtcgaggcgacgttccggccgctgaccgcggagaagggcctggac
ctgtccgtacgggtgtcgccggagctgccggccacgctgcacacggacgagcagcggctg
ctccaggtgctgcggaacctgctgtcgaacgccgtgaagttcaccgactccgggtcggtc
gagctggtcatccggcccgcgggctcggatgtgccgccgtcgatccgggagcagctgctg
gaggcggggtcgctgaccgaggccgacgccccgctgatcgcgttctcggtgaccgacacg
ggcatcgggatcgcggcgagcaagatgcgggtgatcttcgaggcgttcaagcaggccgac
ggcaccacgagccgcaagtacggcggtacggggctggggctgtcgatctcgcgggagatc
gcccagctgctcggcggtgagatccacgcgcagagcgaaccggggcgcggctcgacgttc
acgctgtatttgcctctgcaccccagcgaactgcctccgcaggggtaccagcagcagctg
ccgccgctggacccgggtgacctggtggcgtcggcggccgatctgtcggagctgtcggac
gccgagatcgagacgccggccgaggtgcggtcgtaccgggagacccagaacggcgccgcg
gcgctcttccggcgtcggcgccgggcggcggagctggagcagcggccgacgcagccggag
ctgcggccggcggtcgccgaggagggtccgtcggcccggtcgcggcggggcatccgcttc
ggcggcgagaaggtcctgatcgtggacgacgacatccgcaacgtcttcgcgctgaccagc
gtgctggagcagcacgggctgtcggtgctgtacgcggagaacggccgggagggcatcgag
gtcctggagcagcacgacgacgtggccgtcgtcctgatggacatcatgatgcccgagatg
gacgggtacgcgacgaccacggcgatccggcggatgccgcagttcgccgggctgccgatc
atcgcgctcaccgcgaaggccatgaagggcgaccgggagaaggcgatcgagtcgggcgcc
tcggactacgtgaccaagccggtggaccccgatcatctgctcacggtgatgaaccagtgg
atgagggagcagtga
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