Streptomyces nigra: DC008_26320
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Entry
DC008_26320 CDS
T05839
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
snz
Streptomyces nigra
Pathway
snz00020
Citrate cycle (TCA cycle)
snz00630
Glyoxylate and dicarboxylate metabolism
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01120
Microbial metabolism in diverse environments
snz01200
Carbon metabolism
snz01210
2-Oxocarboxylic acid metabolism
snz01230
Biosynthesis of amino acids
Module
snz_M00009
Citrate cycle (TCA cycle, Krebs cycle)
snz_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DC008_26320
00630 Glyoxylate and dicarboxylate metabolism
DC008_26320
Enzymes [BR:
snz01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
DC008_26320
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR
MerR_1
Sigma70_r4_2
HTH_23
HTH_29
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AWE52859
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Position
complement(5680458..5681720)
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AA seq
420 aa
AA seq
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MRDQEPGPEGRRLTTREAAELLGVKPETVYAYVSRGHLSSRRAPGGRGSTFDAREVETLA
RRNRRESTPGSGSGAELSVRTALTLIEGDRYYFRGVDATELAARHSYEEVAEWLWTGSLR
PGVTFTAPAASVAAARRAAGALPEHAGPVDRLRVAAVAAAAADPLRFDLAETSVLATART
LIPTLVAALGPADPTDRDEGPLARRLWGRLSGRPADEKTLRVLDTALALLVDHDLAASTL
AVRVAASARAHAYAAVSAGLGVLEGPLHGAASGLAHKLIVEVLDRGDAGPVIAEELRAGR
RIPGLGHRLYTGEDARARLLFTLLRELPQCEPALAAAHDIVATAARHTPLHANVDLALAV
FTASFTMPATAGETIFAVGRTAGWIAHALEEYGERPLRMRPSGIYVGSTPPQPLPRPLPE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatcaagaacccggcccggagggcaggcggctgaccacccgcgaggccgccgag
ctgctcggcgtgaagccggagaccgtgtacgcatacgtcagccgcgggcacctcagcagc
cgccgcgcgcccggcggccggggcagcaccttcgacgcccgggaggtcgagacgctcgcc
cgccgcaacagacgggagagcacgcccggttcgggttccggcgccgagctgtcggtacgg
acggccctcaccctcatcgagggcgaccgctactacttccggggcgtggacgcgaccgag
ctggccgcacggcactcctacgaggaggtcgccgagtggctgtggacgggcagtctgcgc
cccggcgtcaccttcaccgcgcccgccgcctccgtcgccgccgcccgtcgcgccgcaggc
gccctgcccgagcacgccggtcccgtcgaccgcctgcgggtagcggcggtcgccgccgcg
gccgccgacccgctgcgcttcgacctggccgagacgtccgtgctcgccaccgcgcgcacc
ctgatcccgacgctcgtcgccgccctcggccccgccgaccccacggaccgcgacgagggc
ccgctcgcccgccgcctgtggggacggctcagcggacgccccgccgacgagaagacgctg
cgggtgctggacacggcgctcgccctgctcgtcgatcacgacctggccgcctccaccctc
gccgtacgcgtcgcagcgtcggcccgcgcgcacgcctacgcggccgtctcggcgggtctg
ggcgtgctcgagggccccctgcacggcgcggccagcggactggcgcacaagctgatcgtg
gaggtgctcgaccggggcgacgccggccccgtcatcgccgaggaactccgggcgggccgc
cgcatcccggggctcggccaccggctctacaccggcgaggacgcccgcgcgcgtctgctg
ttcaccctgctgcgggagctgccgcagtgcgagcccgccctcgccgccgcccacgacatc
gtcgcgacggccgcccgccacaccccgctgcacgccaacgtcgacctggcgctcgccgtg
ttcaccgcgtcgttcacgatgcccgcgacggcaggcgagacgatcttcgcggtgggccgt
acggcgggctggatcgcccacgccctggaggagtacggcgaacgcccgctgcgaatgcgg
ccgtcggggatctacgtcggctccacgcctccccagccgctgccgcgccccctgcccgag
tag
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