Streptomyces nigra: DC008_26345
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Entry
DC008_26345 CDS
T05839
Name
(GenBank) DNA topoisomerase IV
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snz03032
]
DC008_26345
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_26345
Enzymes [BR:
snz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DC008_26345
DNA replication proteins [BR:
snz03032
]
Prokaryotic type
DNA Topoisomerases
DC008_26345
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DC008_26345
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FliT
Motif
Other DBs
NCBI-ProteinID:
AWE52864
LinkDB
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Position
complement(5685527..5687983)
Genome browser
AA seq
818 aa
AA seq
DB search
MARRSTKTPPPDDSFEERILDIDVVDEMQGSFLEYAYSVIYSRALPDARDGLKPVHRRIV
YQMNEMGLRPDRGYVKCARVVGEVMGKLHPHGDASIYDALVRMAQPFSMRVPLVDGHGNF
GSLGNDDPPAAMRYTECRQAQATSLMTESIDEDTVDFAPNYDGQEQEPVALPAAFPNLLV
NGASGIAVGMATNMPPHNLSEVIAAARHLIRHPNADLDTLMRHVPGPDLPTGGRIVGLSG
IRDAYETGRGTFKIRATVEIETVTARRKGLVVTELPFTVGPEKVIAKIKDLVGSKKLQGI
ADVKDLTDREHGLRLVIEIKNGFVPEAVLEQLYKLTPMEESFGINNVALVDGQPLTLGLK
ELLEVYLDHRFEVVRRRSEFRRGKRRDRLHLVEGLLTALIDIDEVIRLIRSSENSAQAKE
RLIGRFSLSDVQTQYILDTPLRRLTKFDRIELEAEKERLGQEIDELTRILESDAELRKLV
SAELAAVAKKFGTERRTVLLESAGTQVSAVPLQVADDPCRVLLSSTGLLARTANGDPFAD
DGDAKRSKHDVIVSAVPATARGEVGAVTSTGRLLRISVVDLPQLPETATRPNLAGGAPLT
EFLSLTEGERVVCLTTLDESSPGLALGTEQGVVKRVVPDYPSNKEELEVITLKEGDRIVG
AVELRTGEEDLVFITDDAQLLRYQASLVRPQGRPAGGVTGIKLAEGAKVISFTAVDPASD
AVVFTVAGSRGTLDDSVQTTAKMTPFDQYPRKGRATGGVRCQRFLKGEDCLSLAWAGPAP
ARAAQKNGTPAELPEMDPRRDGSGVSLPKTVAVVAGPF
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcccgccgcagcacgaagaccccgccgcccgacgactcgttcgaggagcggatcctc
gacatcgacgtcgtcgacgagatgcagggctccttcctcgagtacgcctactcggtcatc
tactcgcgtgccctgccggacgcccgcgacggcctgaagccggtgcaccggcgcatcgtc
taccagatgaacgagatgggcctgcgccccgaccgcggctatgtgaagtgcgcccgtgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacgcgtcgatctacgacgccctg
gtgcgcatggcccagcccttctcgatgcgtgtgccgctggtggacggccacggcaacttc
ggctcgctgggcaacgacgacccgccggccgccatgcggtacaccgagtgccggcaggcg
caggcgacgagcctgatgacggagtccatcgacgaggacacggtcgacttcgccccgaac
tacgacggccaggagcaggagccggtcgccctgccggccgccttcccgaacctcctggtc
aacggcgcgtccggcatcgccgtcggcatggccacgaacatgccgccgcacaacctctcc
gaggtcatcgccgccgcccggcatctgatccgccaccccaacgcggatctcgacaccctg
atgaggcacgtccccggccccgacctgcccaccggcggccggatcgtcggcctctccggc
atccgggacgcctacgagacgggccgcggcaccttcaagatccgcgccacggtcgagatc
gagacggtcaccgcccgccgcaagggcctggtcgtcaccgagctgcccttcacggtcggc
cccgagaaggtcatcgccaagatcaaggacctggtcggctcgaagaagctccagggcatc
gccgacgtcaaggacctcaccgaccgcgagcacggactgcgcctggtcatcgagatcaag
aacggcttcgtgcccgaggccgtcctggagcagctgtacaagctgacgccgatggaggag
tccttcggcatcaacaatgtggcgctggtcgacgggcagccgctcaccctgggcctgaag
gagctgctggaggtctacctcgaccaccgcttcgaggtcgtacggcgccgcagcgagttc
cggcgcggcaagcggcgggaccggctgcacctggtcgagggcctgctcacggcgctcatc
gacatcgacgaggtcatccgtctgatccgctccagcgagaacagcgcgcaggcgaaggag
cgtctgatcggtcgcttctcgctgtccgacgtgcagacgcagtacattctcgacaccccc
ctgcgccgtctcaccaagttcgaccgcatcgagctggaggcggagaaggagcggctgggc
caggagatcgacgagctgacccggatcctggagtcggacgcggagctgcgcaagctggtc
tcggccgaactggcggcggtggcgaagaagttcggcaccgagcggcgtacggtcctgctg
gagtcggccggcacccaggtgtccgccgtgccgctgcaggtcgcggacgacccgtgccgg
gtgctgctgtcctcgacggggctgctggcccgtacggcgaacggcgacccgttcgcggac
gacggcgacgccaagcggtccaagcacgacgtgatcgtctcggcggtgccggccacggcc
cgcggcgaggtcggcgcggtgacgtcgacgggccggctgctgcggatcagcgtggtcgac
ctgccgcagctcccggagaccgcgacgcggcccaacctcgcgggcggcgccccgctgacg
gagttcctctccctgacggagggcgagcgggtggtctgcctgacgacgctcgacgagtcc
tcccccggcctggcgctcggcaccgagcagggcgtcgtcaagcgggtggtccccgactat
ccgtccaacaaggaggagctggaggtcatcaccctgaaggagggtgaccggatcgtcggc
gcggtcgagctgcgcaccggcgaggaggacctcgtgttcatcacggacgacgcccagctg
ctgcgctaccaggcctccctggtgcgcccgcagggccgtccggcgggcggtgtgaccggt
atcaagctggcggagggcgcgaaggtcatctcgttcacggcggtggacccggcgtccgac
gcggtggtgttcacggtcgccggttcgcgcggcaccctggacgactcggtgcagacgacg
gcgaagatgacgccgttcgaccagtacccgcgcaagggccgcgccacaggtggtgtgcgc
tgccagcggttcctgaagggcgaggactgcctctccctggcctgggcgggtcccgccccg
gcgcgggccgcccagaagaacggcacaccggccgaactgcccgagatggacccgcgccgc
gacggctcgggtgtctccctgccgaagacggtagcggtggtggcaggaccgttctga
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