Streptomyces nigra: DC008_27395
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Entry
DC008_27395 CDS
T05839
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
snz
Streptomyces nigra
Pathway
snz03030
DNA replication
snz03430
Mismatch repair
snz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DC008_27395
03430 Mismatch repair
DC008_27395
03440 Homologous recombination
DC008_27395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
snz03032
]
DC008_27395
03400 DNA repair and recombination proteins [BR:
snz03400
]
DC008_27395
Enzymes [BR:
snz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DC008_27395
DNA replication proteins [BR:
snz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DC008_27395
DNA repair and recombination proteins [BR:
snz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DC008_27395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AWE53050
LinkDB
All DBs
Position
5932635..5933417
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AA seq
260 aa
AA seq
DB search
MGWHRELLIGFDLETTGTDPREARIVTGAVVEVRDGLVLGHRQWLADPGVPIPAEAVAVH
GVSNERAAAEGRPADQVADAIADVLVSYWKSGVPVVAYNAAFDLSLLSAELRRHGLPSLR
ERLGGLDPAPVVDPYTIDRRVDRYRRGKRNLEAVCREYGVELDSAHDAFADALAAARLAG
AIAARHPKIASVGPAELHRRQIEWYAEWAADFQTFLRAKGDPAAVGDGTWPVRDPEPPVP
GPAVVGRSVPGEVQIPADRA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcaccgtgagctgctgatcggcttcgacctggagacgaccgggaccgatccg
cgcgaggcgcgcatcgtcaccggcgccgtcgtcgaggtcagggacgggctggtcctcggc
caccggcagtggctggccgacccgggcgtcccgatccccgccgaggccgtcgccgtccac
ggtgtcagcaacgaacgcgcggccgccgagggccgccccgccgaccaggtcgccgacgcc
atcgccgacgtcctggtgtcgtactggaagtcgggcgtcccggtcgtcgcctacaacgcg
gccttcgatctgagcctgctctccgccgagctgcgccggcacggtctgccgtccctgcgc
gagcgcctcggcggcctcgacccggcccccgtcgtcgacccgtacacgatcgaccgccgg
gtcgaccgctaccgccggggcaagcgcaacctcgaagcggtctgccgggagtacggagtg
gagctcgactccgcccacgacgccttcgccgacgccctcgccgcggcccgcctggcaggc
gcgatagccgcccgccaccccaagatcgcctccgtcggcccggccgagctgcaccgccgc
cagatcgagtggtacgccgagtgggcggcggacttccagaccttcctgcgcgccaagggc
gacccggcggcggtcggcgacggcacctggccggtccgcgaccccgaaccccccgtgccg
ggaccggcggtggtcggccggtcggtaccgggcgaggtccagatcccggcggaccgggcc
tga
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