Streptomyces nigra: DC008_28610
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Entry
DC008_28610 CDS
T05839
Name
(GenBank) B/F/G family RNA polymerase sigma-70 factor
KO
K03090
RNA polymerase sigma-B factor
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snz03021
]
DC008_28610
Transcription machinery [BR:
snz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DC008_28610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
DUF7343
HTH_24
MarR_2
HTH_23
GerE
HTH_28
MarR
HTH_Crp_2
HTH_3
DUF134
YdaS_toxin
HTH_26
Motif
Other DBs
NCBI-ProteinID:
AWE53258
LinkDB
All DBs
Position
6204569..6205360
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AA seq
263 aa
AA seq
DB search
MPTTVKARKHPHDDAPDTAADFRTLAALPEGPERDALRGRIVEAWLPMADRLAGRFRSRG
ESLDDLRQVAALGLVKAVDRYDPELGNAFESYAVPTITGEIKRHFRDHMWTLHVPRRVQD
LRNRVRFAVQDLQTVSGDRPTVAEIAAHADLSEADVRVGQEALESFTALSLDAELPGSDD
GYSLSDALGSVDPALDTVVDREAVAPRLAALPERERAILYMRFFGDMTQSRIAEQLGISQ
MHVSRLINRCCSRVRDQVLNDGS
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccacagtgaaagcccgcaagcacccgcacgacgacgcgcccgacaccgccgcg
gacttccgcacgctggccgcgctgcccgagggcccggagcgcgacgcgctgcgcggccgg
atcgtcgaggcgtggctgcccatggccgaccggctggccgggcgcttccgcagccgcggc
gagagcctggacgatctgcgccaggtcgccgcgctcggcctggtcaaggccgtcgaccgg
tacgacccggaactcggcaacgccttcgagagctacgccgtgccgaccatcaccggcgag
atcaagcggcacttccgcgaccacatgtggacgctgcacgtcccgcgccgggtgcaggat
ctgcgcaaccgcgtccggttcgccgtgcaggacctgcagaccgtctccggcgaccggccg
accgtcgcggagatcgccgcgcacgccgacctgagcgaggccgacgtccgcgtcggccag
gaggcactggagagcttcaccgccctgtccctcgacgccgagctgcccggcagcgacgac
ggctactcgctcagcgacgctctgggatccgtcgaccccgccctcgacacggtcgtcgac
cgcgaggccgtcgccccgcgcctggcggccctgcccgaacgcgagcgcgcgatcctctac
atgcggttcttcggcgacatgacccagagccgcatcgccgaacaactcggcatctcccag
atgcacgtctcccgcttgatcaaccgctgctgctcccgagtccgcgaccaggtcctgaac
gacggctcctga
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