Streptomyces nigra: DC008_31545
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Entry
DC008_31545 CDS
T05839
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
snz
Streptomyces nigra
Pathway
snz00521
Streptomycin biosynthesis
snz00523
Polyketide sugar unit biosynthesis
snz00541
Biosynthesis of various nucleotide sugars
snz01100
Metabolic pathways
snz01110
Biosynthesis of secondary metabolites
snz01250
Biosynthesis of nucleotide sugars
Module
snz_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
DC008_31545 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
DC008_31545 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
DC008_31545 (rfbC)
Enzymes [BR:
snz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
DC008_31545 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AWE53771
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All DBs
Position
complement(6855653..6856258)
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AA seq
201 aa
AA seq
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MRPLGIDGAWVLEPQVFEDDRGTFHEWYRGEEFREATGHDLALAQANCSVSRRGVLRGLH
YADVPPGQAKYVTCVRGAVLDVVADIRVGSPTFGQWEAVRLDDGGRRAVFLAEGLGHAFM
ALTDDATVVYLCSTGYDPRREHTVDALDPALGITWPDGLTPVLSPKDARAPSLAEAQEAG
LLPSYQACRERYARARGGEPG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atgcggcccctcgggatcgacggcgcgtgggtcctcgaaccccaggtgttcgaggacgac
cggggcacgttccacgagtggtaccggggtgaggagttccgcgaggccaccggtcacgac
ctggccctggcgcaggcgaactgctcggtctcccggcggggcgtgctgcgcggcctgcac
tacgcggacgtgccgcccggacaggccaagtacgtgacgtgtgtgcgcggcgccgtcctc
gacgtggtggccgacatccgcgtcggctcccccacgttcgggcagtgggaggcggtgcgt
ctggacgacggcggccggcgtgcggtgttcctcgccgaggggctcgggcacgccttcatg
gcgctcaccgacgacgccaccgtggtctacctgtgctcgaccgggtacgacccgcgccgc
gagcacaccgtcgacgccctcgacccggcgctcggcatcacctggccggacgggctcacg
ccggtcctctccccgaaggacgcgcgggccccctcgctggccgaggcccaggaggcgggg
ctcctgccgtcgtaccaggcgtgccgggagcggtacgcgcgggcgcggggtggggagccg
ggctga
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