Streptomyces nigra: DC008_34360
Help
Entry
DC008_34360 CDS
T05839
Symbol
clpB
Name
(GenBank) ATP-dependent chaperone ClpB
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
snz
Streptomyces nigra
Brite
KEGG Orthology (KO) [BR:
snz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
snz03110
]
DC008_34360 (clpB)
Chaperones and folding catalysts [BR:
snz03110
]
Heat shock proteins
HSP100
DC008_34360 (clpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
ATPase_2
Zeta_toxin
nSTAND3
IstB_IS21
NACHT
AAA_14
TniB
AAA_24
bpMoxR
AAA_7
RNA_helicase
NBD_SMAX1
Mg_chelatase
AAA_18
AAA_19
ABC_tran
AAA_33
HAUS-augmin3
DNA_pol3_delta2
AAA_25
T2SSE
AAA_28
DUF3572
Torsin
Prefoldin
Motif
Other DBs
NCBI-ProteinID:
AWE54253
LinkDB
All DBs
Position
7457264..7459903
Genome browser
AA seq
879 aa
AA seq
DB search
MDMNRLTQKSQEALQEAQTAAVRMGQTEVDGEHLLLALLDQEDGLIPRLLRQAGGEPDEL
RAAVGQELSRRPKVTGPGAAPGQVFVTQRLSRLLDAAEREAKRLKDEYVSVEHLLLALAE
EGSSTAAGRLLKEHGITRDSFLSALTRIRGNQRVTSANPEVAYEALEKYGRDLVAEARDG
KLDPVIGRDAEIRRVTQILSRKTKNNPVLIGDPGVGKTAIVEGLAQRIVRGDVPEGLRDK
TVFALDMGSLVAGAKYRGEFEERLKAVLSEVKAAQGHILLFVDELHTVVGAGAAEGAMDA
GNMLKPMLARGELHMIGATTLDEYRKYIEKDAALERRFQQVLVDEPSVEDTISILRGLRE
RLEIFHGVKIQDNALVSAATLSHRYITDRFLPDKAIDLVDEACARLRTEIDSMPAELDEI
TRRVTRLEIEEAALSKETDPASKSRLEELRKELADLRGEADAKHAQWEAERQAIRRVQEL
RQELEQVRHDAEEAERAYDLNRAAELRYGRLQDLERRLKAEEEQLAAKQGEKRLLREVVT
EEEIAEIVAAWTGVPVARLQEGEREKLLRLDEILRERVIGQDEAVKLVTDAIIRARSGIR
DPRRPIGSFIFLGPTGVGKTELAKTLARALFDSEENMVRLDMSEYQERHTVSRLMGAPPG
YVGYEEGGQLTEAVRRKPYSVVLFDEVEKAHTDVFNTLLQILDDGRITDAQGRTVDFRNT
VIIMTSNIGSEHLLDGATADGEIKPDARALVMGELRGHFRPEFLNRVDDIVLFRPLGERQ
IEQIVELQFNELRSRLAERRITVELTDSARELIAHQGYDPVYGARPLRRYISHEVETLVG
RALLRGDVQDGATVRVDAQAGELVVTYDQPEDVKGAQAA
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggacatgaaccgtctcacccagaagtcacaggaagccctccaggaggcgcagaccgcc
gccgtccgcatgggccagaccgaggtcgacggtgagcatctgctgctcgcgctgctcgac
caggaggacggcctgatcccgcggctgctgcggcaggcgggcggggagcccgacgagctc
cgtgcggcggtggggcaggagctgtcccgccggcccaaggtgaccggccctggagcggcg
ccgggccaggtgttcgtcacccagcgcctgtcccggctgctcgacgcggccgagcgggag
gccaaacgcctcaaggacgagtacgtgtccgtggagcacctcctgctggccctggccgag
gagggctcgtccaccgccgccggacggctgctcaaggagcacggcatcacccgggactcg
ttcctgagcgcgctgacccggatccgcggcaaccagcgcgtcacctccgccaaccccgaa
gtcgcctacgaggctttggagaagtacggccgtgatctggtcgccgaggccagggacggc
aagctcgacccggtgatcggccgggacgccgagatccgccgtgtcacccagatcctgagc
cgcaagaccaagaacaatccggttctgatcggtgacccgggtgtcggcaagaccgccatc
gtggaaggcctggcccagcgcatcgtccgcggcgacgtgcccgaaggactgcgcgacaag
accgtgttcgcactcgacatgggctcgctggtggccggggcgaaataccgcggcgagttc
gaggaacgcctcaaggccgtactgtccgaggtgaaggcggcccaggggcacatcctgctc
ttcgtcgacgaactccacaccgtcgtgggcgcgggcgccgccgaaggagccatggacgcg
ggcaacatgctcaagccgatgctcgcgcgcggcgaactccacatgatcggcgccaccacc
ctcgacgagtaccgcaagtacatcgagaaggacgccgccctcgaacgccgcttccagcag
gtcctggtcgacgagccgagcgtggaggacaccatctccatcctgcgcgggctgcgcgaa
cgcctggagatcttccacggtgtgaagatccaggacaacgcgctggtgtccgcggccacc
ctcagccaccgctacatcaccgaccggttcctgcccgacaaggccatcgacctcgtcgac
gaggcgtgcgcccggttgcgtaccgagatcgactcgatgcccgccgaactggacgagatc
acccgccgcgtcacccgcctggagatcgaggaggcggccctctccaaggagaccgacccc
gcgagcaagagccggctcgaggaactgcgcaaggaactcgccgacctgcggggggaggcc
gacgccaaacacgcccagtgggaggccgaacggcaggcgatccgccgtgtgcaggagctg
cgccaggaactggagcaggtccgccacgacgccgaggaggccgaacgcgcctacgacctc
aaccgcgccgccgaactgcgctacggccgactccaggacctcgagcgccggctgaaggcc
gaggaggagcaactggccgccaagcagggggagaagcggctgctgcgcgaggtcgtcacc
gaggaggagatcgccgagatcgtcgccgcctggaccggtgtgcccgtcgcccgtctccag
gagggcgaacgcgagaagctgctgcgcctcgacgagatcctgcgcgagcgcgtcatcggc
caggacgaggccgtcaaactcgtcaccgacgcgatcatccgcgctcgctccggcatccgc
gacccgcgccgtcccatcggctcgttcatcttcctcggccccaccggagtcgggaagacc
gagctggccaagaccctcgcccgggccctgttcgactccgaggagaacatggtgcggctc
gacatgagcgagtaccaggagcggcacaccgtcagccggctcatgggcgcaccgcccgga
tacgtcggctacgaggagggcggccagctcaccgaggccgtgcgccgcaagccgtactcg
gtcgtgctgttcgacgaggtcgagaaggcgcacaccgacgtcttcaacaccctgctgcag
atcctcgacgacggccgcatcaccgacgcccagggccgcaccgtcgacttccgcaacacc
gtgatcatcatgacgtccaacatcggctccgagcacctcctcgacggcgccaccgccgac
ggcgagatcaagccggacgcccgcgccctggtgatgggcgaactgcgggggcacttccgc
cccgagttcctcaaccgcgtcgacgacatcgtgctgttcaggccgctcggtgagcggcag
atcgagcagatcgtggagctgcagttcaacgagctgcgaagccgcctcgccgagcgtcgc
atcaccgttgaactcaccgattcggcccgggagctgatcgcccaccagggctacgacccg
gtgtacggggcccggccgctgcggcgctacatctcccacgaggtcgagaccctcgtcggg
cgcgccctgctgcgcggcgacgtacaggacggcgccacggtccgcgtcgacgcccaggcc
ggagagctggtggtcacctatgaccagcccgaggacgtgaagggagcgcaggcggcatga
DBGET
integrated database retrieval system
