Sulfuriroseicoccus oceanibius: G3M56_000200
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Entry
G3M56_000200 CDS
T07818
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
soa
Sulfuriroseicoccus oceanibius
Pathway
soa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3M56_000200 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soa03021
]
G3M56_000200 (rho)
03019 Messenger RNA biogenesis [BR:
soa03019
]
G3M56_000200 (rho)
Transcription machinery [BR:
soa03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
G3M56_000200 (rho)
Messenger RNA biogenesis [BR:
soa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G3M56_000200 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
HC2
Spore_III_AA
S1CSD-TOTE-2
AAA_25
NACHT
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
QQL45044
UniProt:
A0A6B3L9C9
LinkDB
All DBs
Position
51368..53287
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AA seq
639 aa
AA seq
DB search
MSESDNTPPTGAEDAQAAPKKKTTRKKVAAKKTAAKKTAAKKTTTKKTAAKKTTAKKTTR
KKAATKKVASEAPAEPTPAPKATSTDESPKRDIKPAAEKPAPEKTAPPKESTPPAQPAAN
TPAPQSAPTEEPSKPKVTRESISRRPRRDNRERTDDQDERGERNERNDRRGGRRNDRDRD
REPSDSNDEQGERSDRNDRRGGRRNDRRGGRNNRDRNRRGGRNNRRGRRNDNDQPDVDTD
HDFDEIDDDPNVKPGFRDRKRNREQLKLDTARPCEGFLEISTKGFGFLRTRQSGFQPSPS
DVFVLPDTVRHFGLRQGMMIIGEACDGPRGPQMTDVKSVNGRSPEAFKALSYFEELTAIN
PDRRFVLETTPDRYTTRVIDMMTPIGRGQRGLIVAPPRAGKTTLLQHIAEAISENYEDVH
LMTLLIDERPEEVTALTRSLPNAEVFASSNDNDARSHMRVAEFAIERAKRLVEEGRDVFI
LLDSITRLGRAFNNAKRGKGRSMSGGVDIRALEIPRKLFAAARNTREAGSLTIIATALIE
TGSRADDLIFQEFKGTGNMELVLDRKIAQKYVYPAVDIFRSGTRREELLLPPHQLAKISL
IRRGLSGHKPIEAIERLLTFLERFPNNAQMLMEIKAQGY
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaatccgacaacactcctccaaccggcgccgaagacgcccaagccgcgccgaag
aagaagaccacgcgcaaaaaagtagcggcaaagaaaaccgctgccaaaaagaccgcggca
aagaagacgactaccaaaaagacggcagccaagaaaaccaccgcgaagaaaacgacgcgc
aaaaaggcagccaccaagaaagtcgccagcgaggcacctgcggaaccaacaccggctcca
aaagcaacgtccactgacgaatctccaaagcgagacatcaagcccgctgcggaaaaaccc
gcaccagaaaagacggcaccaccaaaggagagcacacctccagcccaacctgctgcaaat
acgcccgcccctcaatccgcaccgaccgaggaaccatccaaacccaaggtcacacgcgaa
tccatttcccgccgcccacgacgcgacaaccgcgaacggaccgacgatcaagacgaacgc
ggcgagcgcaacgagcgcaatgaccgacgcggcggacgccgcaacgaccgcgatcgcgat
cgcgaaccgtcagactcaaacgacgagcaaggcgagcgctcagatcgcaatgaccggcgc
ggaggacgccgcaacgaccgacgcggtggacgtaacaaccgcgaccgcaaccgacgcggc
gggcgcaacaaccgccgcggacgccgcaacgacaacgaccagccagacgtcgacaccgat
cacgatttcgacgaaatcgacgacgatccaaacgtcaagccaggcttccgcgaccgcaag
cgcaaccgcgagcaactcaaactcgacaccgcgcgcccatgcgaagggttcctggagatt
tccaccaaaggattcggcttcctgcgcacccgccagtccggcttccagccatcgccatca
gacgtcttcgtcctcccggacaccgtgcgccacttcggcctgcgccagggcatgatgatt
atcggtgaagcttgtgacggcccgcgcggcccgcagatgaccgacgtcaaatccgtcaac
ggccgctcaccggaagcctttaaggcgctttcctactttgaggaactgaccgcgatcaac
ccggatcgccgtttcgttctggaaaccacaccggatcgttacaccacccgcgtgatcgac
atgatgaccccgattggccgaggccagcgaggactgatcgtcgccccaccgcgcgccggt
aagaccaccctgcttcagcacattgccgaagccatcagcgagaactacgaggacgttcac
ttgatgacattgctcatcgacgagcgtccggaagaagtcaccgcactcacccgctcgctg
ccgaacgccgaagtatttgccagctcaaacgacaacgacgcccgcagtcacatgcgtgtc
gccgagttcgccatcgagcgcgccaagcgcctcgtcgaagaagggcgtgacgtcttcatc
ctgctcgactccatcacccgtctcggccgcgcgttcaacaacgccaagcgaggcaaaggc
cgcagcatgtcgggcggtgtcgatatccgcgcactggaaattccacgtaaactcttcgct
gccgcgcgcaacacccgcgaagcaggctcgctgaccatcatcgccaccgcgttgatcgaa
accggaagccgcgccgacgacctgattttccaggagttcaaaggcaccggtaacatggaa
ctggttctcgaccgcaagatcgcgcaaaagtacgtctacccagccgtcgatatcttccgc
tccggcacccgccgcgaagaactgctgctgccgccacaccaactggcgaagatctcactc
atccgccgcggtctctcgggccacaagccgatcgaagccatcgagcgcttgctcaccttc
cttgagcgcttcccgaacaacgcgcagatgctaatggagatcaaagcccagggatactaa
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