Sulfuriroseicoccus oceanibius: G3M56_003510
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Entry
G3M56_003510 CDS
T07818
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
soa
Sulfuriroseicoccus oceanibius
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soa03019
]
G3M56_003510
Messenger RNA biogenesis [BR:
soa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
G3M56_003510
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GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
QQL45669
UniProt:
A0A6B3LFF9
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All DBs
Position
complement(916515..917897)
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AA seq
460 aa
AA seq
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MSYDSISDAPLSISAAKSACAEQTVPATVHCQIESIVEKQTKTGKPYYEITLRDATDQVT
LKAWQDTPGFAAAESGRLAPNDFIAVTGGWSTSQYGVDCRDWTAAKLDEDATDRLLAGTG
ELRAKQDSDWATILHYISQVADPRLKAVADLFIARHGSHMRRTAAARRNHHARRGGLVEH
VAQMMRTADSLCEAYPRLNRDLLQVGILLHDCGKLWENAYPEDGFTMPFQLSGELLGHIP
IGIEVANKLWHSAVDSPDAPAEWKTITPSSEEARLHLLHLIGSHHGTHEFGSPVLPRTPE
AIALHHIDNIDAKLEMMFAGYETTAQIAPGIYDRVFPLPGHLVEPLASVDPEVATTAQPS
VPSTPNITQPQQPEPVAASEPALTEPEVETAQPLTIEPEIATSPAAEIAATDVPESTPEP
EAIEPESTPSEDDSQPEPPAKKPEKPLPAPAQDDLGDLFA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgattccatttccgacgcccccctttcgatttccgctgcaaaatccgcctgc
gccgagcagaccgtccccgccaccgtgcactgccagattgagtccatcgtggagaagcag
accaagacgggcaagccgtactatgaaatcacgctgcgcgacgcgaccgaccaggtcaca
cttaaagcgtggcaggacaccccgggcttcgccgccgcggaatctggtcgcctcgccccg
aatgatttcatcgccgtgaccggcggctggtcaacctcacaatacggcgtcgattgccgc
gactggaccgcagccaagctcgacgaagacgccacagaccgcctgctcgccggcaccgga
gaactcagagccaaacaagacagcgactgggccacgattctccactacatcagccaagtc
gccgacccacgcctcaaggcagtggccgatttgttcatcgctcgccacggctcccacatg
cgccgcaccgccgccgcacgccgcaaccaccacgcacgccgcgggggactggtcgaacac
gtcgcccaaatgatgcgcaccgccgatagcctctgcgaagcctacccacgcctcaaccgc
gacctgctccaggtcggcatcctgctccacgattgcggcaagctgtgggagaacgcctac
ccggaggacggcttcaccatgccattccaactcagcggcgaactgctcggacacatcccg
atcggcatcgaagtggccaacaaactctggcacagcgcagtcgattcaccggacgcaccc
gccgagtggaaaacaatcacgccatcgagcgaagaggcacgactccacttgctgcacctc
attggctcgcaccacggcacccatgagttcggctcgccagtgctgccacgcacgccggaa
gccatcgcgttgcaccacattgacaacatcgacgcaaaactcgagatgatgtttgctggc
tatgagacgacagctcagatcgcccccggcatctacgaccgcgtgttcccgcttccgggg
catttggtagaacctctcgcatccgtggatccagaggttgctacaaccgcccaacctagc
gtaccctcgacgccaaacatcacacagccccagcagccagaacccgtcgcagccagcgaa
cctgcgctcacggagcctgaggtcgaaacggcacaacctctcacgatcgagccagaaatc
gcaacctctccagcggctgaaatcgccgccacagacgtaccggaatcgactccagaacca
gaagccatcgagcctgagagcactccatccgaagacgactctcaaccagaaccaccagcg
aagaagcctgagaagccactcccggcacccgctcaggacgacctcggcgatctcttcgcc
tag
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