Sulfuriroseicoccus oceanibius: G3M56_007015
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Entry
G3M56_007015 CDS
T07818
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
soa
Sulfuriroseicoccus oceanibius
Pathway
soa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3M56_007015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soa03019
]
G3M56_007015
03016 Transfer RNA biogenesis [BR:
soa03016
]
G3M56_007015
Enzymes [BR:
soa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
G3M56_007015
Messenger RNA biogenesis [BR:
soa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
G3M56_007015
Transfer RNA biogenesis [BR:
soa03016
]
Prokaryotic type
tRNA degradation factors
G3M56_007015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
KH_2
OB_RRP5_4th
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QQL46316
UniProt:
A0A6B3L897
LinkDB
All DBs
Position
1733420..1735549
Genome browser
AA seq
709 aa
AA seq
DB search
MSIHKVTSQVGSGEITIEAGRFAPLADGAVMVQLGETSVLVTAVSQTKVRDGQDWFPLSV
EYKEKASAAGKFPGGYFKREGRPTEKEILTCRMTDRPLRPLFPKGYFYDTQIVALLLSAD
GVNDADILAMNGASAALHISDIPFAKPIGAVRVGRIDGEFVANPTHDEREESDLDLVYVG
SKDEVIMIEGAGDEVPEEIFIKALNFAQEKVQVLVAAQEELRSLCGKEKRQYELKVAQQD
LLDVAYEVAGDRIEDAIYKPSKHERGAAVEALRDEVREAILAKFPDTGSFEIDQAFDFLQ
KKAFRVSILEKGKRADGRGVGDLRPLTGEVGMIPRVHGSGFFARGETSALGLATLAPLDE
AQMLDSYVGGVDSKRFILHYNFPPFSVGETGRMGGINRREIGHGALAERSVEPVIASEDE
FPYAIRVSSEVMSSNGSTSMATVCAASMALMDAGVPLKRPVAGISVGLVTDMDEAGNIKR
YERLLDIIGSEDFFGDMDFKLCGTTEGVTGYQLDLKLPGIPLTILEEAIIQAKDARADVL
AAMAEGIAETRPAISKYAPRIESVKINPDRIGDLIGPGGKVIRGIQAESGTELSVDEDGT
VHIYAIKQEGLERAKQLIKARTAEIEVGETYTGKVVSTTNFGAFMEVLPGKDGMIHISQL
ADFRVEKVEDVVKVGDMVTAKCIGIDEKGRVKMSRKEAMKEQEAEEVEL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtatccataaagtaacgagccaagtcggctcaggagaaatcaccatcgaagccggg
cgttttgccccgttggcagacggtgccgtgatggtgcagcttggcgagaccagcgtgttg
gtcaccgccgtgtcccagaccaaggttcgcgatggtcaggactggttcccactttccgtt
gagtacaaagaaaaagcatctgcagctggtaagttcccaggcggttacttcaagcgtgaa
ggacgtccgaccgagaaggaaatcctcacctgccgcatgaccgaccgtccattgcgtccg
cttttccctaagggttacttctacgacacccagatcgttgcgttgcttctcagcgctgac
ggtgtgaacgacgctgacatcctcgcgatgaacggtgcatcggccgcacttcacatctcc
gacattccgttcgccaagccaattggtgcggtgcgcgtcggtcgtatcgacggtgagttc
gttgccaacccgacccacgacgagcgcgaagagagtgatctcgacctcgtgtacgttggt
tcgaaggacgaagtgatcatgatcgaaggtgctggtgatgaagttcctgaagagatcttc
atcaaggcattgaacttcgctcaggagaaagtccaggtgctggttgcagcgcaggaagaa
cttcgttcgctctgcggtaaagagaagcgtcagtacgagctcaaagtggctcagcaggac
ctcctcgacgtggcctacgaagtggcaggtgaccgcatcgaagacgcgatctacaaacca
agcaagcacgagcgtggtgctgcagtggaagctctccgcgacgaagtgcgcgaagccatc
cttgccaagttcccagacaccgggtcgttcgaaatcgaccaggcattcgacttccttcag
aagaaggcattccgcgtttccatccttgaaaagggcaagcgtgccgacggccgtggcgtg
ggcgacctccgtccgctgactggtgaagtgggaatgatcccacgtgtgcacggatcgggc
ttcttcgcccgtggcgagacctccgcactcggactcgcgaccctcgcaccactcgacgaa
gctcagatgctcgacagctacgtgggtggcgtcgacagcaagcgcttcatccttcactac
aacttccctccattctccgtgggtgagaccggccgcatgggcggaatcaaccgtcgtgaa
atcggtcacggtgcccttgccgagcgttcggtggagccagtgatcgcatcggaagacgag
ttcccatacgcaatccgcgtgtcgtcggaagtgatgtcgtcgaacggttcgacctcgatg
gctaccgtgtgtgccgcatcgatggctctgatggacgccggtgtgccactcaagcgcccg
gttgcaggtatctccgtgggtctcgtgaccgacatggacgaagctggcaacatcaagcgc
tacgagcgtcttctcgacatcatcggctccgaggacttcttcggtgacatggacttcaaa
ctctgcggaaccaccgagggtgtgaccggttaccagcttgacctcaagcttccaggtatc
ccactcaccatccttgaggaagcgatcatccaggccaaggacgcacgtgcagacgtgctc
gcagcaatggcagaaggcatcgccgaaacccgccctgcgatcagcaagtacgctcctcgc
atcgagtcggtcaagatcaacccagaccgcatcggcgacctcatcggacctggtggcaag
gttatccgcggcatccaggccgagagtggtaccgagctcagcgtcgacgaagacggcacc
gttcacatctacgcgatcaagcaggaaggcctcgagcgcgccaagcagctcatcaaggca
cgtaccgctgagatcgaagtgggcgagacctacaccggtaaagtggtcagcaccacgaac
ttcggtgcgttcatggaagtgcttccaggcaaggacggcatgatccacatctcccagctt
gctgacttccgcgtcgagaaagtcgaagacgtggtcaaggtcggcgacatggtcaccgcc
aagtgcatcggtatcgatgagaagggccgcgtgaagatgtcccgcaaggaagccatgaag
gagcaggaagctgaagaagtggagctgtaa
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