Sulfuriroseicoccus oceanibius: G3M56_009730
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Entry
G3M56_009730 CDS
T07818
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
soa
Sulfuriroseicoccus oceanibius
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soa03016
]
G3M56_009730 (truB)
Enzymes [BR:
soa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G3M56_009730 (truB)
Transfer RNA biogenesis [BR:
soa03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G3M56_009730 (truB)
Prokaryotic type
G3M56_009730 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Halo_GVPC
Motif
Other DBs
NCBI-ProteinID:
QQL46402
UniProt:
A0A6B3L112
LinkDB
All DBs
Position
complement(2413891..2414658)
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AA seq
255 aa
AA seq
DB search
MNSQRHPIPKGKKRPQLPNVDGVLLIDKGPDMTSHDVVAIARRALNQKKIGHCGTLDPMA
TGLLILLLGKATKLQDLLMAEHKVYEATMTLGATTDSQDKEGEIVEERPVPPLTLDDVTA
AFDKYNGDFYQTPPMVSAIKKDGVPLYKLARKGKTVEREPRFVRVLKYAIRRFESPEIDF
AVACSKGFYVRTYAHDIGQELECGAHLSALRRTRSGKFSVDHEKVVTAEELKTANRESLA
GRILSLAEVSLMRGA
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgcagcggcatccaattcctaagggcaagaagcgcccgcagcttccgaatgtg
gacggggttttgttaatcgacaaaggccctgatatgacatcgcatgacgtggtggcgatc
gctcgtcgagcgctcaaccagaagaagatcggtcattgcgggacattggatccgatggcg
accggtttgctgattttgttgctcggcaaggcgaccaagctccaggatctgctgatggcg
gagcacaaggtctacgaggcaacgatgacgctcggtgcgacgactgattcgcaggacaaa
gagggcgagatcgtggaagagcggccggttcctccattgactctggatgacgtgacggct
gcttttgacaagtacaatggcgacttctatcagacgccgccgatggtctcagcgatcaag
aaagacggtgttccgttgtacaagttggcgcgtaagggcaagacggttgagcgtgagcct
cgctttgtgcgcgtgctgaagtatgccatccgtcgttttgagtcgcctgagatcgatttt
gcagttgcttgcagcaaggggttctatgttcgcacctatgctcacgacattggtcaggag
ttggagtgcggggcgcacctctctgcgttgcgccgtacacgcagcggtaagttctccgtg
gaccacgagaaagtggtgaccgctgaagagcttaagactgccaaccgtgaaagccttgca
ggccgtattctcagcttggctgaggtgtcgctgatgcgcggtgcctag
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integrated database retrieval system
