Sulfuriroseicoccus oceanibius: G3M56_011560
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Entry
G3M56_011560 CDS
T07818
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
soa
Sulfuriroseicoccus oceanibius
Brite
KEGG Orthology (KO) [BR:
soa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
soa03016
]
G3M56_011560
Enzymes [BR:
soa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
G3M56_011560
Transfer RNA biogenesis [BR:
soa03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
G3M56_011560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DUF2894
Motif
Other DBs
NCBI-ProteinID:
QQL44511
UniProt:
A0A6B3L588
LinkDB
All DBs
Position
complement(2863121..2864308)
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AA seq
395 aa
AA seq
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MTDQQVPGSPVGGDRPPLEAEYLWIDSAEALESFAASLPAPGGLIGMDLEADNMHCYQEK
LCLLQVDGGEGAVGLIDPLVIDDLSPLTKRLFDPAGEIWMHGADFDISLMSAAFGEVPPM
IWDTQIAAQLCGFRRFGLAAVTEEILGFTMSKGSQKEDWSKRPLTQKMLDYAALDARLMF
PLSEFFKKRLVELGRWDWFEESCVAARENVLNRAPRDPDTVWRVNGWGKVPKGRAQAYLR
ELWHWRDREAERRDRPHFKVVNNRDLVQLATKLGSSSKPSRKDLRWRLSKKALAEFGDVV
EKVEAMAASDYPQRPAVQRLAKDDAFDDRVNALIAKRNAVAAEHDLEPSLIAPRKTIELL
ALHSDPIAAFDPANESPGRPRPMMLNWQRQLLGLI
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcagcaagtgcccggatcgcccgttgggggagatcgcccacctctggaagca
gagtacctttggattgattcagccgaagcgctggagtcgtttgcagcgtcgcttcccgcg
cctggtgggttgatcgggatggatctcgaagccgacaacatgcactgctatcaagagaag
ctgtgtttgttgcaagttgatggcggtgaaggcgcggttggtttgattgacccgttggtg
atcgatgatttgtcacctttgaccaagcggctgtttgatccggcgggggagatctggatg
catggcgctgacttcgatatttcgttgatgagcgcagcgttcggagaggtgcctccgatg
atctgggacacgcagattgcggcgcagctttgtggttttcgtcgcttcggtctcgctgct
gttaccgaagagattctggggttcacgatgtccaagggttctcagaaggaggattggagc
aaacgcccgttgactcagaagatgctcgattatgcggccttggatgctcgtttgatgttt
ccattgtcggagtttttcaagaagcgtctggttgagttggggcgttgggattggtttgag
gagagttgtgtggcggcgcgtgagaatgtgctcaaccgtgcaccgcgcgatcctgatact
gtttggcgggtgaatggttggggcaaagtgccgaaggggcgagcccaagcctacctgcgc
gagctgtggcattggcgcgaccgtgaggcggagcgccgtgaccggccgcacttcaaggtg
gtgaacaaccgcgacttggtgcagttggcgaccaagcttgggtctagttcgaagccaagc
cgcaaagatttgcgctggcgcttgtcgaaaaaggcgttggctgagtttggcgacgtggtg
gaaaaggtggaggcgatggctgcctctgattatccacagcgtccggctgtgcagcgtctg
gccaaggacgatgcgtttgacgaccgggtgaatgcactgattgccaagcgcaatgcggtt
gctgccgagcatgatttggagccgtcgttgattgcaccgcgcaagacgattgagctgttg
gcgttgcattcggatccgattgccgcgtttgatccggcgaatgagagtccggggcgtccg
cggccgatgatgctgaactggcagcgtcagttgttgggcctgatttag
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