KEGG   Sulfuriroseicoccus oceanibius: G3M56_012700
Entry
G3M56_012700      CDS       T07818                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
soa  Sulfuriroseicoccus oceanibius
Pathway
soa03030  DNA replication
soa03430  Mismatch repair
soa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:soa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    G3M56_012700
   03430 Mismatch repair
    G3M56_012700
   03440 Homologous recombination
    G3M56_012700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:soa03032]
    G3M56_012700
   03400 DNA repair and recombination proteins [BR:soa03400]
    G3M56_012700
Enzymes [BR:soa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     G3M56_012700
DNA replication proteins [BR:soa03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     G3M56_012700
DNA repair and recombination proteins [BR:soa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     G3M56_012700
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: QQL44724
UniProt: A0A6B3L504
LinkDB
Position
complement(3128571..3129191)
AA seq 206 aa
MPVKNSSYAHAPASLPLGKVPFVAIDFEAAGAARGMTDAPVQIGMASMLGSEIDTESFFR
SFIKPGHEVAWTAQRVHGIGPETVEDAPMLGELWPELQRRLGGAVVVAHGAPTEKRYLRA
FPGHGFGPWVDTLWLARKVLPDAESHRLGDLVQLLGMEDELSRMCPGLKWHDALYDAVAS
LLILQAVIAEPGMADQPLSCICPELA
NT seq 621 nt   +upstreamnt  +downstreamnt
atgcccgtgaagaattccagctatgcccatgcaccggcttcccttcctttggggaaggtg
ccatttgttgcgatcgatttcgaagcggcgggtgctgcacgcgggatgacggatgccccg
gtccagattggcatggcgtcgatgctgggaagcgagatcgacaccgagagcttcttccga
tcgttcattaaacccggacatgaagtggcgtggaccgcgcaacgcgtgcacgggatcggg
ccggagaccgtagaggatgctccgatgctcggggaactgtggccggagttgcagcggcga
ctcggcggcgcggtggtcgtggctcatggagctcccactgaaaaacgttacctgcgtgcg
ttccccggtcacgggttcggtccgtgggtggatacgctgtggctggcgcgcaaggtgttg
ccggatgccgagagtcaccggttgggggacttggtccagcttttggggatggaagacgag
ctgtcgcggatgtgcccagggttgaaatggcacgacgcgctttacgacgcggtggcatcg
ttgctaattttgcaggccgtgatcgctgaacctggaatggccgatcaaccactgtcgtgc
atttgccctgagttggcatag

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