Solibacillus sp. R5-41: CSE16_00140
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Entry
CSE16_00140 CDS
T05144
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03030
DNA replication
sob03430
Mismatch repair
sob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSE16_00140
03430 Mismatch repair
CSE16_00140
03440 Homologous recombination
CSE16_00140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sob03032
]
CSE16_00140
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_00140
Enzymes [BR:
sob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSE16_00140
DNA replication proteins [BR:
sob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSE16_00140
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSE16_00140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
RuvB_N
AAA_5
AAA_22
AAA_30
AAA_16
AAA_14
AAA_24
Mg_chelatase
Rad17
AAA_assoc_2
AAA_19
ResIII
TIP49
AAA_7
DnaX_C
AAA_2
AAA_18
PIF1
TsaE
RNA_helicase
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
ATP38585
UniProt:
A0A2D1SNA0
LinkDB
All DBs
Position
33480..35234
Genome browser
AA seq
584 aa
AA seq
DB search
MTYQAFYRVYRPQSFREMSGQTHVKRTLQNALLGNKTTHAYLFSGPRGTGKTSTAKIFAK
ALNCENAPASEPCNECATCKSITEGSHTDVIEFDAASNSRVEEMRDIIEKVRFAPADARF
KVYIIDEVHMLSTSAFNALLKTLEEPPEHAVFILATTEPHKLPATIISRCQRFDFKRLSS
VDIVERMKIVLEDIQMNYDEQALKIIAQAAAGGMRDALSLLDQVVSFSNESIQLEDVLLV
TGSVSQDAFYDIACLLKEKEVASVLGIVENLIADGKEPLRLAEDFITFFRDLLLLQMDGT
LEELLEFISHEQKFVELAQNFDADTLYGFINILAKTQQEMRFSHHTKIYLETALLKMAQL
KGNAPVTTGVDSALAGKLTSLENIVGQLSQQLQNGGVPAQQVKTPSPQRVRPAGNQYNPP
NGRIKEVLKTASKTDIQKIKAAWAMSLSQMQRSQAALLADAEPVAANSDAFVLKFKYDIH
CQMVADNKGLVSLFTQGIAMETGIQYEVLCIPEQAWLKLRENFIKENGLDQKKQEANSNE
VTDQPHLLEEQPFIEDALLVEAQDPLIVEAEQRFGKDFVDVVEE
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
ttgacatatcaagcgttttatcgtgtttatcgaccacaatcattccgcgaaatgtctggt
caaacacatgtgaaaaggacccttcaaaatgctctcctcgggaataaaacaacacatgct
tatttattttcagggcctcgaggtactgggaagacaagtacagctaaaatttttgcaaaa
gcgttaaattgtgaaaatgcccctgccagtgagccatgtaatgaatgcgctacatgtaaa
agtattacagaaggatcgcatacagatgtaattgagttcgatgcagcttcgaattcaaga
gtagaggaaatgcgggatattattgagaaggtccgttttgctccagcagatgctcgtttt
aaagtgtatattattgacgaagtgcatatgctgtctacgagtgcgtttaatgccttatta
aagacattagaagaaccccctgaacatgcggtatttattttagcgacgacagagccacat
aaactacctgcaaccattatctctcgttgtcagcgttttgattttaaacgactatcttcc
gtagatattgtcgagcgaatgaaaatcgtccttgaagatatccaaatgaattatgatgag
caggcacttaaaataattgcacaagcggcagccggtggtatgcgtgatgcattaagttta
ctggatcaagtagtctcttttagtaatgaatctatccaattagaagatgtgttacttgtg
acggggtcggttagccaagatgcattttacgatattgcttgtttactcaaagaaaaagaa
gttgctagtgtgttaggtattgttgaaaatttaatcgcggatggaaaagagccgttacgt
ttagcggaagattttataacgtttttccgagatttattgttattgcaaatggatggaacg
ttagaagagctgcttgaatttatttcacacgaacagaaatttgtagagctagcccaaaat
tttgatgcagacacactgtatgggtttattaatattttggcaaaaacacaacaggaaatg
cgcttttcacatcacacgaaaatttatttagagacagcccttttaaaaatggctcaactt
aaagggaatgctcctgtaacaactggagtggattctgctttagcgggtaaattaacatca
ttggaaaatattgttggacagttatcgcaacaattacaaaacggtggggtaccggcgcaa
caagtaaaaaccccttctccacagcgtgtacgaccggcaggtaatcaatataatcctccg
aatgggcgcattaaggaagttttaaaaaccgctagtaagacggatattcaaaagattaag
gctgcctgggcaatgtcattatcgcaaatgcaaagatctcaagcagcacttttagctgat
gcagagcctgttgcggcaaattcggatgcttttgtgttaaaattcaagtatgatattcat
tgtcaaatggtagcagacaataaaggacttgtttcgttgtttacgcaaggaattgctatg
gaaacaggcattcaatatgaagtgctttgtattccggagcaagcatggctcaagttgcga
gaaaactttataaaagaaaatggcttggaccaaaagaagcaagaagccaattcaaacgag
gtaactgatcaaccgcatttgcttgaagaacaaccttttatagaagatgcactactagtg
gaagcgcaagatccattaatagttgaggcagaacaacgatttggaaaagactttgttgat
gttgtcgaagaataa
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