Solibacillus sp. R5-41: CSE16_01945
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Entry
CSE16_01945 CDS
T05144
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03420
Nucleotide excision repair
sob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSE16_01945
03430 Mismatch repair
CSE16_01945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_01945
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSE16_01945
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSE16_01945
MMR (mismatch excision repair)
Other MMR factors
CSE16_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
UvrD_C_2
AAA_11
DEAD
Viral_helicase1
AAA_30
ResIII
AAA_22
Mg_chelatase
nSTAND3
PDH_C
IstB_IS21
AAA_5
FtsK_SpoIIIE
RuvB_N
AAA_16
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
ATP38879
UniProt:
A0A2D1SP86
LinkDB
All DBs
Position
406960..409155
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AA seq
731 aa
AA seq
DB search
MEQNIWQQEQTHLSTISELLKMHIAALTVQLKKQKGEIVEERTFASSEFNDVSGENAIQF
SQMLQTMQLREREYLNVNEQLAKSKILYKSPYFGRISIKNELGEPEHLYIGLSTFREPVS
DDMLIFDWRAPISSLFYENKVGPSRYQIPDGEYIDVIIEGRRQYKITYDQLLQLFDADIY
IGDEVLQGLLADTAKEKMKSIVATIQSDQNAVIRSSNKDNLIVLGPPGSGKTSVAMQRIA
FLLYEYRQTMNARSILLISPSDLFNDYISNVLPELGEENVQHTTYFRLLRDLKLTQYKCE
TNYENIERLQKADAEAREHYAFKGSHPYTKQLLNYIESVKKAGIPFYNLKMGEEVFISAR
KLSQLFYEKFGELDLDFRLKKIRTMLHAKLRERKQKEMSVRMKELRAVNAYIGSDKELEQ
QAHNELNKRFGRLEQTIEQLGFVNIHKMYLQSITYTNDNLFTQAVQASTAQNLKNHVLNY
EDLAPMMYLQSVVKGLYANNIIKHIVIDEIQDYSYLQLLTLKVMHPKAHYTLLGDRNQIV
HPQMKDSLDGPISKHFKVVELNKSYRSTNEITDFMSAILQNTTTLSLGVAGDKPQIIETQ
QSPKAIQQLIVEQYKEEDSFVILCKNKAACEQLYEALKPLVPDLQLVTEKQKVYMKGILI
MPGYMAKGFEFTTVVLADANANVYVEEMDAYLLYTIASRATRKLFLLTRGQLPRALAHIE
SQHYCKEVQTI
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggaacagaatatttggcagcaggagcagacacatctatcaacaattagtgaactcctt
aaaatgcatatagcagcattaacagttcaattgaaaaaacaaaaaggtgaaattgtcgag
gagcgtacatttgcttcctctgaatttaatgatgtttcaggggagaatgcgattcaattt
tcgcaaatgttgcaaacgatgcagctccgtgaacgtgaatatttgaatgtgaatgagcaa
ttagcaaaatctaaaatcttatataaaagtccatattttggacggatttctataaaaaat
gaactaggtgagccggagcatttatatatcgggctctcgacatttcgtgagccggtttcg
gatgatatgctcatttttgactggcgagcaccgatttcaagtctattttacgaaaataaa
gtaggaccttctcgttatcaaattccagatggcgaatatattgacgtaataatagaagga
agacgccaatataaaataacatacgaccagttgctgcaattattcgatgcggatatttac
attggagatgaagtgttacaaggattgcttgcagatacggcgaaggaaaaaatgaagtcg
attgttgccacgattcaaagcgatcaaaatgccgtcattcgttcgtccaacaaggataat
ttaattgtgcttggtcctccaggtagtggaaaaacatcggttgccatgcagcgaatcgca
tttttactttatgaatatcgccaaacgatgaatgcgcgcagtattttactcatttcaccg
tctgatttatttaatgattatatttcgaatgtacttccggagttaggcgaggaaaatgta
cagcatacgacctatttccgtttgcttcgcgatttaaagttgacgcaatataaatgtgaa
acgaattatgagaatattgaacgcttgcaaaaggcggatgcagaggcgcgggagcattac
gcttttaaaggctcacatccttatacgaaacagctgcttaactatattgaaagtgttaaa
aaggcgggtatcccgttttataatttgaagatgggtgaggaagtatttatttcagcccgc
aagctatcccaacttttttatgagaaatttggcgaactcgatttagatttccgtttgaaa
aaaattcgtacaatgctgcacgctaagctacgtgaacgaaagcaaaaggaaatgagtgtg
cgcatgaaggaattacgtgcggtcaacgcttatattggctcggataaagaacttgaacag
caagcacataatgaattaaataagcgattcggcagacttgaacaaacgattgaacagctc
ggctttgtgaatattcataaaatgtatttacaatcaataacgtatacaaatgacaattta
ttcacacaggccgtacaggcgagcacagcacaaaatttgaaaaatcacgtacttaattat
gaagatttggcaccgatgatgtatttacaatcagttgtgaaagggctatatgcgaataac
atcattaagcatatcgttattgatgaaattcaagattactcttatttacagctgctcacg
ctaaaggtgatgcatccaaaagcgcattacacgttacttggtgatcgcaatcaaattgtg
catccccaaatgaaagattcattagatgggcccatttctaagcattttaaagtagtagaa
ctcaataaatcttatcgttctacaaatgaaattactgattttatgagtgcgattttacaa
aatacaacgacactttcccttggtgtagcgggtgataaaccacaaattattgaaacacag
caatccccaaaagcaatccagcaacttattgtggagcagtataaggaggaggatagcttt
gtaattttatgcaaaaataaagcagcttgcgaacagttatatgaagccttaaagccactt
gtgcccgatttgcagctcgtgacagaaaaacaaaaagtgtatatgaagggaatcctcatt
atgccaggctatatggcgaagggctttgaatttacaacggttgtgttagcggatgccaat
gcaaatgtatacgtggaagaaatggacgcctatcttctatatacgatcgcgtcacgtgca
acgaggaaactattccttttaacgcgcggacaattgccaagagcacttgcacacatcgaa
tcgcagcattattgcaaagaagttcaaacgatttaa
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