Solibacillus sp. R5-41: CSE16_02140
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Entry
CSE16_02140 CDS
T05144
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSE16_02140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_02140
Enzymes [BR:
sob01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CSE16_02140
DNA repair and recombination proteins [BR:
sob03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CSE16_02140
Prokaryotic type
CSE16_02140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
iSTAND
Motif
Other DBs
NCBI-ProteinID:
ATP42341
UniProt:
A0A2D1SYY9
LinkDB
All DBs
Position
447327..448004
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AA seq
225 aa
AA seq
DB search
METLTNTWRDILAPQLQQPYFQQLQQFLQQQYSEETVYPKKSDILNALQLTDFPIVKVVI
LGQDPYHGINQAHGLSFSVKNGQKLPPSLKNMLKELQEDVGCPIPQNGDLTAWAEQGVLL
LNTVLTVREKEANAHKGQGWEEFTDAIIERIANRAEPAVFLLWGKPAQSKRTLIERFHKN
HIILEAPHPSPLSAYRGFFGSKPYSQTNAALIAMGNEPIQWCLSD
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atcgagactttaacgaatacgtggcgtgatattttagctccacaattacaacaaccttat
tttcaacagctccagcaatttttacaacagcaatatagtgaagaaacggtttatccgaaa
aagtcggatattttgaatgctttacaattaacggatttcccaattgtaaaagtcgttatt
ttagggcaggatccgtatcatggcattaatcaagcgcacggtttaagcttttcagtaaag
aatggacaaaagctgccgccaagcttgaaaaatatgttgaaagaattacaggaggatgtc
ggctgtccgattccgcaaaatggtgatttaacagcatgggcagagcagggagttctccta
ttaaatacggtgcttacagtacgtgaaaaagaggcaaacgcacataaaggacagggctgg
gaggaatttacagatgccatcattgaacgtattgccaaccgtgcagagcccgctgttttt
cttctatggggtaagcctgcacaaagtaagcgtacattaatcgaacgttttcataaaaat
catattatcctagaagcaccacacccaagtccgctaagtgcatatcgcggtttttttggg
agtaagccttattcacaaacaaatgcggcattaatcgcaatggggaacgagccgattcaa
tggtgtttatccgattaa
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