Solibacillus sp. R5-41: CSE16_02325
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Entry
CSE16_02325 CDS
T05144
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSE16_02325 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sob03021
]
CSE16_02325 (rpoE)
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_02325 (rpoE)
Transcription machinery [BR:
sob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSE16_02325 (rpoE)
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSE16_02325 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
ATP42346
UniProt:
A0A2D1SZ57
LinkDB
All DBs
Position
494042..494608
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AA seq
188 aa
AA seq
DB search
MHDLNFRDMTKEQIAEESLIDLAYAILEDKKQAMPLNDLLKEIQALNGISNGDLKARLVQ
FYTDLNVEGRFLLNNENGWGLREWYKVETIEEETAPTIKARKKKSKATDDEDEDLVDLDE
EDVVFDEDFDEFIEEEEEDIEFVEEEIEDIDTDLDEELIDEEESFIIEGEDDDEDEEDEE
EEDEEDLK
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
gtgcacgatttgaactttcgtgatatgacaaaagaacaaatagcagaagagtcgttaatc
gacttagcatacgcaattttagaagataaaaaacaggcgatgccattaaatgatttatta
aaagaaatccaagctttaaatggtatttctaatggagatttaaaagcgcgcttagtacaa
ttttatacagacctaaacgtagaaggtcgcttccttttgaacaatgaaaatggttgggga
ttacgtgaatggtataaagttgaaacaattgaagaagaaacagctcctacaattaaagca
cgcaagaaaaaatcaaaagctacagacgacgaagatgaagatttagttgaccttgacgaa
gaagatgtagtattcgatgaagatttcgatgagttcattgaagaagaggaagaagacatt
gagttcgtggaagaagagattgaagatatcgacacggatcttgatgaagaattaatcgat
gaagaagaaagcttcattatcgaaggcgaagatgacgacgaagatgaagaggacgaagaa
gaggaagacgaagaggatttaaaataa
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