Entry |
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Name |
(GenBank) excinuclease ABC subunit A
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KO |
K03701 | excinuclease ABC subunit A |
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Organism |
sob Solibacillus sp. R5-41
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:sob00001]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSE16_03130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:sob03400]
CSE16_03130
DNA repair and recombination proteins [BR:sob03400]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSE16_03130
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSE16_03130
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
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Position |
688421..691288
|
AA seq |
955 aa
MKNTEIVVQGARAHNLKNIDVTIPRDKIVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLS
AYARQFLGQMDKPDVDTIEGLSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARIGKP
ICPKHGIEITSQTIEQMVDRLMEYPERTKMQLLAPVVEGKKGTHVKLIEDLKKQGYVRIR
LNGELRDLDDHIELDKNKKHTIEVVIDRVVVKEGVESRLSDSLEAALRLADGRVLVDVME
HEELLFSEHHSCPYCGFSIGELEPRMFSFNSPFGACPTCDGLGSKTKVDLELVIPDWDKT
LLETAIAPWESVSSQYYPQLLASVCKHYQIAMDIPVKDIPKEMMDKILYGSGKDKIHFDF
INDYGSHYKKDIEFEGVIHNIERRFKDSSSDYVRDQLQKYMTEQPCQSCKGHRLKAESLA
VKIKDQNISEATRRSIQEMYDFFNSVELTEKEKQIAKLIIREVVERLRFLLDVGLNYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLIHTLENMRDLGNT
LIIVEHDEDTMLAADHLIDIGPGAGIHGGQIIAQGTPKQVMKNKNSITGQYLSGKKFIPL
PLERRKPDGRMLKIKGATENNLKNVSVDIPLGQFIAVTGVSGSGKSTLVNEILYKSLASK
LNRSKVKPGAHKSIEGIEQLEKVIEVDQSPIGRTPRSNPATYIGVFDDVRDVFAMTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEICHGKRYNRETLEIRYKD
KNISDILEMTVENALDFFSNLPKIQRKLQTIVDVGLGYIKLGQPATTLSGGEAQRVKLAS
ELHKRSNGKSFYILDEPTTGLHVDDISRLLVVLQRLVENGETVLVIEHNLDVIKTADHII
DLGPEGGDGGGTILTTGTPEKIAEVKESYTGYYLKPILERDRERMDDKIVAAKNK |
NT seq |
2868 nt +upstreamnt +downstreamnt
gtgaaaaatacagagatagttgtacaaggagcaagagcacataatttaaaaaatatagat
gttactattccacgtgacaaaattgttgtcgtgacggggctttccggttcgggcaagtcc
tcactcgctttcgatacgatttatgcagaggggcagcgacgttatgtagagtccctatct
gcctatgcacgccaatttttagggcaaatggataaaccggatgtcgatacaattgaaggg
ctatcgcctgccatttcaatcgaccaaaaaacaactagccgtaatccacgttcaacggta
ggtacagtgacggaaatttacgattatttacgactgctttatgcccgtattggtaaacca
atttgtccaaaacacgggatcgaaattacatcacaaacaattgagcaaatggttgatcgt
ttgatggagtacccagaacgcacgaaaatgcagctactcgcgcccgttgtagaaggaaaa
aaagggacacatgtgaagcttattgaagatttgaaaaagcaaggctatgttcggattcgc
ttgaacggggagctgcgtgatttagatgatcatattgagctggataaaaataaaaagcat
acgattgaagtcgtaattgaccgcgtcgtcgtaaaagagggcgttgaatctcgtttaagt
gactctttggaggctgcgttaaggctggcggatggtcgcgtattagtcgatgtgatggag
catgaggaattattatttagcgagcatcattcctgcccgtattgcggattttctattggt
gaattagagccgcgcatgttttcatttaacagtccatttggcgcgtgcccaacatgcgat
ggattaggcagcaaaacgaaagtggatttagagctcgttattccagattgggataagacg
ttactcgaaactgcaattgcaccgtgggagtcggtatcatcacaatattacccgcaatta
ttagcatcagtttgtaagcactatcagattgcaatggatattccggtaaaagacattcca
aaagaaatgatggacaaaattttatatggctcgggcaaggacaaaattcatttcgacttc
attaatgattatggtagtcattataaaaaggatattgaatttgaaggggtgattcacaat
attgagcgccgttttaaagattcctcttcggattatgtacgcgatcaattgcaaaaatat
atgacggagcagccatgtcagtcgtgtaaaggccatcgtttaaaggctgaatcgcttgcg
gtgaaaattaaagaccaaaatatttccgaagctactcgtcgctcgattcaagaaatgtat
gactttttcaattcagtggagctgacggaaaaggaaaagcaaattgcgaaattaattatt
cgagaagtagtggagcggctcagatttttattagatgttggattgaattatttaacgtta
tctcgtgcggctggtacgttatcgggcggtgaggcacagcgtattcgactagcaactcaa
atcgggtcgcgtttatcaggcgtgttatatatactggatgaaccgtcaatcggactgcat
cagcgtgataatgatcgcttaattcatacgcttgaaaatatgcgtgatttaggaaataca
ttaattatcgtcgagcatgatgaagatacgatgctagcggcggaccatttaattgatatt
ggcccaggtgcgggtattcatggtgggcaaattattgcgcaaggaactccgaagcaagtg
atgaaaaataaaaattctatcacgggccaatatttaagtgggaagaaatttattccgctt
cctttagaacgtcgcaaacctgatggacgtatgctgaaaataaagggtgcaacagaaaat
aacttgaaaaatgtgtctgtagacattccattaggccagtttattgccgtgacaggcgtt
tcggggtctggaaaatcgacgcttgtgaatgaaattttgtataagtcactcgcatccaag
ttaaatcgttcgaaagtaaagccgggtgcgcataaatcaattgaagggatcgaacaatta
gaaaaggtaattgaagtcgatcaatctccaattgggcgtacaccacgttcgaatcctgcg
acatatattggtgtatttgatgatgttcgagatgtttttgcgatgacaaatgaagcgaaa
gtgcgcggctataaaaagggacgtttttcatttaatgtgaagggcggacgttgtgaagct
tgtcgtggggatggcattattaaaattgaaatgcacttcttaccggatgtgtatgtgcct
tgtgaaatttgtcatggcaagcgctacaatcgggaaacgctggaaattcgctataaagac
aaaaatatttcggatattttagaaatgaccgtagaaaatgcgcttgattttttcagtaat
ctaccaaaaattcaacgtaaacttcaaacgattgttgatgtagggctcggctatattaaa
ttaggacaacctgcaacgacgctttccggtggtgaggcgcagcgtgtaaaattggcctct
gaactgcataaacgttcgaacggaaagtcattttatattttagatgagccgacgactggt
cttcatgtggacgatatttcccgcttattagttgtgttacagcgtttagttgaaaatgga
gaaaccgtgcttgttattgaacataatttagatgtaatcaaaacggcggatcatattatt
gatttaggtccagaaggtggtgatggcggtgggacaattcttacaaccggcacacctgaa
aaaattgcagaagtaaaagaaagctatacaggatactacttaaagccaattttagaacgg
gaccgcgaacgtatggatgataaaattgtagcggcgaaaaataagtaa |