Solibacillus sp. R5-41: CSE16_03185
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Entry
CSE16_03185 CDS
T05144
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sob
Solibacillus sp. R5-41
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_03185 (addA)
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSE16_03185 (addA)
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CSE16_03185 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
DUF2059
AAA_12
Motif
Other DBs
NCBI-ProteinID:
ATP39107
UniProt:
A0A2D1SPR9
LinkDB
All DBs
Position
705397..709116
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AA seq
1239 aa
AA seq
DB search
MMIPTKPKNVQWTDVQWKAIYASGHDILVSAAAGSGKTAVLIERLIQKILAPEDRRIDVD
ELLVVTFTNASAAEMRNRMAEALEKSIAQDPQNAFLRRQLSLLNKAQISTLHSFCLTICR
EYAYTIDLDPGFRLASTEEAALLQDDVLMDVLEKAYRGDMAHLFTKEELYTLVDSFATDR
SDQAIEKLLQEMYKVSRVQPDPYEWLRALPMKYDIDEQLPIDDLLIAQEIRPMIVANLKE
VVARLEKGFQIVSVQPALQKNEALFAIEYGAAKQVLEAMDSGTWEEAYALMPLIKFDRIK
PVGKKDTEEDQRFYSIAKGYRDQAKDMLATLSETFFARHPKLYVKEMAETKPIMETLVKL
TIEFSEAFKQAKQDRGLLDFSDLEHYALEILSHAEIKTMPPTPSEVAMNFKERFKEVLVD
EYQDVNRLQETILQLVKSGDEADGNLFMVGDVKQSIYAFRLAEPRLFLEKYKRFDENPIN
NGMKIDLNANFRSRSEVLAGTNYVFEQIMDEEVGEIQYDEQAKLKFGASYDEQQVPVELV
LLEGDSKLQTVLNSDGNGDEEESISSAQQEARYIIMRIQEMVRGGAQVYNPKTKSTRPIS
YRDIVVLMRSRTWYATFAEEFKMAGLPLYAETDGGYFESLEVMIMLNTLKVIDNPYQDIP
LASVLRAPFIGLTENELAAIRLINGKVPFYEALKQYMVNASGEMAIATEQKLQKFLTLHE
KWRNFSRHGSLADLIWQVYLDTSYFEMVGAMVNGKQRQANLRALHDRALSYEKTSFRGLF
RFLRFIDRMHSRGDDLGIAKSIGEADDVVTLLTIHKSKGLEYPVVFVAGMSRGFNTKDLG
NRYIFDQEFGLAIKSVNPDLNVMSTSLPHLYVKEKKLAKMKAEEMRILYVAMTRAKEQLI
LVGSIKDWEKQKDEWSFYQELEETVLPSYTRSKANHYLSWVGPAVARHQDFLFAQYGKQK
EATHAAQWFVNIISNEAFLAAATEEETIQTEQVEQVDESLVDLLTHRFLSTYPYEHAVTK
KSKTSVSELKRLESLQRMEEEQVYNSNAVNYVKAAVPSFMLKKKERKLSATEVGTAVHAV
MQHIPQEGFQTLTETTDFIQSLVTRQLLQQIEADAIEVEKILAFFQTDVGQRFKHAKQTL
REVPFTWSLKDAEGDAQIIQGVIDCLFEDEFGQWVLLDYKTDRIESGILDDLEKIKQKMT
KTYHIQLNYYQQAIESIKHVKVSERLLYLYSIGKEVKID
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgatgattccaactaaaccgaaaaatgttcaatggacagatgtacagtggaaagccatc
tatgcatcaggtcatgatattttagtatcggcagcggcagggtcagggaaaaccgctgta
ttaattgaacgcctcattcaaaagattttagcgccagaagatcgtcgtattgatgtggat
gaattattagtcgttacttttacaaatgcttcggcagctgaaatgcgtaatcggatggca
gaggcactggaaaaatcgattgcacaagatccacaaaatgcttttttacgtcgtcagctt
agcttattaaataaagcacaaatttcgacgttgcactctttttgcctaacaatttgtcgt
gaatatgcgtatacaatcgatttagatccaggttttcgtttagcaagtacagaagaagcg
gcattgttacaagatgatgtgttaatggatgtactagaaaaagcgtatcgcggagatatg
gctcatttatttactaaggaagagttgtatacgcttgttgatagttttgctacggaccgc
agtgaccaagcaatcgaaaagctattgcaagaaatgtataaagtgtcgcgtgtacagcct
gacccgtatgaatggttacgcgcattacctatgaaatatgacattgatgaacaattgccg
attgatgatttactaattgcacaggaaattcgaccgatgattgttgcaaacttgaaagaa
gtggtggcgcgccttgaaaaagggttccaaattgtttctgtacagccagcactccaaaaa
aatgaagccctttttgcaattgaatacggggcagcaaagcaagtgcttgaagcgatggat
agtggtacatgggaggaagcgtatgcattaatgccacttattaaatttgaccggattaag
cctgttgggaaaaaagatacggaagaggatcagcgtttttatagcatcgcgaaagggtac
cgtgatcaggcaaaggatatgcttgcaactttatcagaaacgttttttgcccgtcatccg
aaactgtatgtgaaagaaatggcagaaacgaagccgattatggaaacgctcgtcaaatta
acgattgaatttagcgaagcattcaaacaagcaaaacaggatcgtgggctactcgatttc
tcggatttagaacattatgcgttagaaattttatcgcatgccgaaatcaaaacgatgcca
ccaacgccgtctgaagtagcaatgaattttaaggaacgctttaaggaagtgcttgtggat
gagtaccaggatgtgaatcgacttcaagaaacgattttacagcttgtgaaaagtggagat
gaggcagatggtaacttgtttatggtcggcgatgtaaaacagagtatttatgcgttccga
ttagccgagccgcggttattccttgaaaaatataagcgatttgatgaaaatccaatcaat
aacggtatgaaaatcgatttaaatgcgaatttccgaagtcgttctgaagtattagccggc
acaaattatgtgtttgagcaaattatggacgaagaagttggcgagattcaatatgatgaa
caagcaaaattaaagtttggcgcaagctatgatgagcagcaagttccggttgagcttgtt
ttattagagggcgattcgaagctgcaaactgttttaaattcagatggtaacggtgacgaa
gaggaaagtattagctcggcgcaacaggaggcccgctatattattatgcggattcaagaa
atggtcagaggcggggcacaagtatataacccaaaaacaaaatcaacgcgtccgatcagt
tacagagatatagtcgtgctcatgcggtcacgtacttggtatgcgacgtttgctgaggaa
tttaagatggcgggattaccactttatgccgaaacagatggcggttattttgaatcattg
gaagtcatgattatgctgaatacgttaaaagtaatcgataatccgtatcaggatatcccg
ttggcatctgttttacgcgcgcctttcatcggtctaaccgaaaacgagcttgcggccatt
cgtttaattaatgggaaagtgccattttatgaagcgcttaagcaatatatggtcaatgca
tctggtgaaatggcgattgcaaccgagcaaaaattgcaaaagttcttaacgctacatgaa
aaatggcgcaatttttcccgtcacggctcgcttgcagacttaatttggcaagtgtattta
gatacgagttactttgaaatggtcggggcaatggtgaacgggaaacagcgtcaagcaaat
ttacgcgcgcttcatgaccgtgcacttagctatgaaaaaacatccttccgtgggttattc
cgttttttacgatttatcgaccgtatgcattcgcgcggggatgatttagggattgccaaa
tcaatcggagaagccgatgatgttgtcacgctattaacaattcataaatcaaagggcttg
gaatatccagtcgttttcgtggcggggatgagtcgtggatttaatacgaaagatttaggg
aaccgctacatttttgaccaagaatttggacttgctattaagtctgtcaacccagattta
aacgtcatgtcaacgtcactgccacatttatatgtgaaggaaaagaagcttgccaaaatg
aaggcagaggaaatgcgcattctttatgtggcaatgactcgtgcaaaagagcagttaatt
ttagttggttccattaaagattgggaaaagcaaaaagatgaatggtcattttatcaggag
ttagaggaaactgtattgccgagttatactcgatcgaaggcgaatcattatttaagttgg
gttggaccagctgttgcaaggcatcaggactttttatttgcacaatatggtaaacaaaag
gaagcaactcatgcagcgcagtggtttgtaaatatcatttcaaatgaagcgtttttagcg
gcggcaacagaggaagaaacgattcagacagagcaggtagagcaagttgatgaatctctc
gtggatttattaacgcaccgctttttatcgacgtatccatatgaacatgcagtgacgaaa
aaatcaaaaacttccgttagtgaattaaagcgattagaaagccttcaacgaatggaagaa
gagcaagtttataattcgaacgcagtaaactatgttaaggcggctgttccgagctttatg
ttaaagaaaaaggaacgtaagctgtcagcaacagaagtcggtacagcagttcatgcggtg
atgcagcatataccacaggaaggctttcaaacgttgacagaaactacagattttattcaa
tcactcgtgacgcgccaattactacaacaaattgaagctgatgcaatagaggtagaaaag
attctcgccttcttccagacggatgttggtcagcgctttaagcatgccaagcaaacttta
cgtgaagtgccatttacatggagtctcaaagatgccgagggtgatgcacaaattattcaa
ggggtgattgactgtctttttgaagatgaatttggccaatgggtgttacttgactataaa
acggatcgtattgaaagtggaatattagacgatttggagaaaattaaacaaaaaatgaca
aaaacatatcacattcaattaaactattatcaacaagctattgaatccattaaacatgtc
aaagtaagtgaacgtttattgtatttatatagtattgggaaagaagtgaaaattgattag
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