Solibacillus sp. R5-41: CSE16_04385
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Entry
CSE16_04385 CDS
T05144
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sob
Solibacillus sp. R5-41
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sob03032
]
CSE16_04385
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_04385
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CSE16_04385
DNA replication proteins [BR:
sob03032
]
Prokaryotic type
DNA Topoisomerases
CSE16_04385
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CSE16_04385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
DUF2996
Toprim_3
Toprim_2
TTc_toxin_rep
Motif
Other DBs
NCBI-ProteinID:
ATP39340
UniProt:
A0A2D1SQE8
LinkDB
All DBs
Position
955461..957545
Genome browser
AA seq
694 aa
AA seq
DB search
MADYLVIVESPAKAKTIERYLGKKYKVKASIGHVRDLPRSQMGIDTENDYQPKYITIRGK
GPVLQELKTAAKKVKKIYLAADPDREGEAIAWHLANALNVDIDSDCRVVFNEITKDAILE
SFKHPRPINMDLVDAQQARRILDRLVGYNISPILWKKVKKGLSAGRVQSVSLRLIIDREN
EIKNFLPEEYWTVEGSFEKGKKQFDALYYGDAEGKVKLTNEAQVQAILKNIKGDSFEVMN
VVKKERKRNAALAFTTSSLQQEAARKLNYRAKKTMMLAQQLYEGIELSKKEGAVGLITYM
RTDSTRISDTAKAEAVAYIDGKYGEAFIAQEVKQPKKKANAQDAHEAIRPTSAMRTPEEL
KAILSRDQLRLYRLIWERFIASQMAPAVLDTVTVDLQNVDVVFRANGSQVKFPGFMKLYI
EGTDDQAEETTKLLPEMAVGDKVKSIEIEPKQHFTQPPPRYSEARLVKALEELGIGRPST
YAPTLDTIQKRGYVQLDAKRFVPTELGEIVHQATFEFFPEIINIEFTAQMEQNLDEIEEG
ITKWVKVIDDFYKDFEPRVKYADEVMEKIEIKDEPAGEDCEKCGAAMVYKLGRYGKFMAC
SNFPDCRNTKAIVKLIDVKCPTCKEGEVVERKSKTKRVFYGCNRYPECEFVSWDKPISRP
CPKCSASLVEKKLKKGVQIQCTNSDCDYEETPSQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcagattatttagtaattgtggaatcacccgcaaaggcaaaaacaatagaacgttat
ttaggaaagaaatataaagtgaaggcatcgattggacatgtacgtgatttgccacgtagt
caaatgggtattgatacagaaaatgattatcaaccgaaatacattacaattcgtggaaaa
ggtcctgtccttcaagaattaaaaacagctgcaaaaaaagtaaaaaaaatctacctagca
gccgatccagatcgcgaaggggaagcaattgcttggcacttagcaaatgcgttgaacgta
gatatagattcggattgtcgcgttgtattcaatgagattacgaaagatgctattttagaa
agctttaagcatccgcgtccaattaatatggatttagtagatgcacagcaagcgcgtcga
attttagaccgacttgtagggtataatattagtccgattttatggaaaaaggttaaaaaa
ggactttcagcaggtcgcgttcagtcggtatcactgcgtttaattattgatcgtgaaaat
gagattaaaaatttcttacctgaagaatactggactgttgaaggttcatttgaaaaaggt
aaaaagcaatttgatgcactttactacggggacgctgaaggaaaagtcaaattgacgaat
gaagcgcaagtacaggcaattttgaaaaatattaaaggcgattcttttgaggtaatgaat
gttgtgaaaaaagaaagaaaacgtaatgcagcgcttgcgtttacaacttcttctttacag
caagaggcagcacgtaaattgaattatcgtgcgaaaaaaacgatgatgcttgcacagcaa
ctttatgaaggtattgaactgagtaaaaaagaaggtgctgttggtttaattacgtatatg
cgtacggattctacacgtatttctgatacggcaaaagccgaagcagtcgcttatattgat
gggaaatatggcgaagcgtttattgcgcaagaagtaaaacaaccgaaaaagaaagccaat
gctcaagatgcacatgaagcgattcgtcctacaagtgcaatgcgtacacctgaagagttg
aaggcgattttaagtcgtgatcaattgcgtttatatcgtttgatttgggaacgctttatc
gcaagtcaaatggcaccagctgtattagatacggtaacggtagacctacaaaatgtggat
gtggtattccgagcgaatggatctcaagttaaatttcctggttttatgaagctttatatt
gagggtacggatgaccaagcagaagaaacgacgaaactgttacctgaaatggccgttggg
gataaagtgaaatccattgagattgaaccaaaacaacatttcacgcagccaccaccacgt
tattctgaggcgcgtttagtaaaagcgttagaagaattaggaatagggcgcccatcgaca
tacgcaccaactttagacacgattcaaaaacgtggctatgtacagcttgatgcaaaacgt
tttgttccaaccgagctaggagaaattgtccatcaagcgacattcgagtttttcccagaa
atcatcaatattgaatttacggctcaaatggagcaaaatttggatgaaattgaagaaggc
atcacaaaatgggtgaaagtaattgatgacttttataaagatttcgagccacgcgtaaaa
tatgcggatgaggtcatggaaaaaattgaaattaaagatgagccagccggagaagattgt
gaaaaatgtggcgccgccatggtttataaattaggtcgttacgggaaatttatggcatgt
tcaaattttccagactgccgcaacacaaaagcgattgtgaaattaattgatgtaaaatgc
ccaacatgtaaagagggcgaagttgtagaacgaaaatcaaaaacaaagcgtgtgttttat
ggctgtaatcgatatccagaatgcgaattcgtttcgtgggataagccaattagtagacct
tgtccgaaatgtagtgcatcattagtagagaaaaagttgaaaaaaggtgttcaaattcaa
tgtacaaacagtgactgtgattacgaggaaacaccgtcacaataa
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