Solibacillus sp. R5-41: CSE16_04575
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Entry
CSE16_04575 CDS
T05144
Name
(GenBank) FliA/WhiG family RNA polymerase sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
sob
Solibacillus sp. R5-41
Pathway
sob02020
Two-component system
sob02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSE16_04575
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSE16_04575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sob03021
]
CSE16_04575
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sob02035
]
CSE16_04575
Transcription machinery [BR:
sob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSE16_04575
Bacterial motility proteins [BR:
sob02035
]
Flagellar system
Flagellar assembly proteins
Stator
CSE16_04575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DnaD_N
IF2_N
UPF0122
Motif
Other DBs
NCBI-ProteinID:
ATP39375
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All DBs
Position
990363..991133
Genome browser
AA seq
256 aa
AA seq
DB search
MTQQRHMEEQALWIRWTTDRDTDAGELLIRKFKPLVSYHVQRIAVGLPKNVSRDDLTSLG
MMGLFDALNKFDINRDLKFDTYASFRVRGAIIDGLRKEDWLPRSAREKAKKLEGQIESLE
QKLMRHATPEELAEHMNIPIEEIYQTFHEHFYSNVLSINEQLDQDENEGKSFVIRDDHNK
TPEQQIVHSELLGDLAQNIQKLNEKEQLVVSLFYTEEMTLTEIGEMLELSTSRISQIHSK
ALFKLRKLLTSEMINA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
gtgactcagcaaaggcatatggaagagcaagcactatggattcgttggacaactgaccga
gataccgatgcgggtgagctgcttataagaaaatttaagccactcgtgtcctatcatgta
caacgtattgcggtaggtttacccaaaaatgtttcacgagacgatttgactagtctggga
atgatgggtttatttgatgcgcttaacaagtttgatataaatcgcgatttgaaattcgat
acatacgcctcttttcgagttcgtggcgcaatcattgatgggttacgaaaagaggattgg
ttaccacgctctgctcgtgaaaaggctaaaaagttagaaggacaaatcgaaagtttagaa
caaaagttgatgcgtcatgcaacaccagaagagctagcagaacatatgaatatacctatt
gaagaaatctatcaaactttccatgaacatttttattcgaatgttttatctattaatgaa
caattagatcaagatgaaaatgaaggtaagtctttcgttattcgagatgatcataataaa
acacccgaacaacaaattgtgcattcggaactattaggggatttggcccaaaacatccaa
aagttaaatgaaaaagaacaacttgtcgttagtttgttttatacagaggaaatgacttta
accgaaattggtgaaatgttggaattatctacgtcacgtatttctcaaattcactcgaaa
gcgttatttaaattacgtaaactattaacttctgaaatgattaatgcatag
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