Solibacillus sp. R5-41: CSE16_04635
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Entry
CSE16_04635 CDS
T05144
Symbol
polC
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03030
DNA replication
sob03430
Mismatch repair
sob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSE16_04635 (polC)
03430 Mismatch repair
CSE16_04635 (polC)
03440 Homologous recombination
CSE16_04635 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sob03032
]
CSE16_04635 (polC)
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_04635 (polC)
Enzymes [BR:
sob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSE16_04635 (polC)
DNA replication proteins [BR:
sob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSE16_04635 (polC)
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSE16_04635 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
tRNA_anti-codon
HHH_3
Rv2179c-like
RNase_H_2
YhfH
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
ATP39386
UniProt:
A0A2D1SQL7
LinkDB
All DBs
Position
1002462..1006787
Genome browser
AA seq
1441 aa
AA seq
DB search
MAQQEAKQKFLLLLQQLELTDDVYMSFFEKGELERVTVHKKKRVWHFKIKVNNILPFEVY
QLLRARMAEKFSHIASVSLTIDSFNPIVNEQHILDYWYPTIEQISDMSPLLRENLSQQVP
KWTGHKLVVTSMLEVEYLSLKAKYTDKIAESYRAFGFPHIPLEFKLVEESEEFIAQQEAF
YMQRQVEEERLSKQAMADFAMREKEKSDNPGAVTSDAPFQLGSFIKNAESADIRTILEEE
RSIIIEGFIFAVDIKELRSGRSLLEMKVSDYTDSLMVKMFSNSDEDVAKMNMISKGMWVR
LRGSIQMDTFARDLVMMVKDINEIKKEPRKDYAPEGEKRVELHLHTPMSQMDAMTPVDKL
VAQAAKWGHPAIAITDHAVVQSFPEAYSAGKKNGIKVIYGVEANLVDDGKPIAYDPIDSL
LEDTTYVVFDVETTGFSNVYDTIIELAAVKIKNGQVLDTFERFSNPHRKLTAKIIELTHI
TDDMLVNAPEIEEVIKEFHDFIGDAVVVAHNAAFDLGFLYVAYKKAGLEHVRHPGIDTVE
LSRLVNPAQKSHSLKTLTKKYNIELTQHHRAIYDTEATGELLLHLLKQTADLGIQNLNEL
NDHVGGEEGYKQARPSHCTILAVDDAGLKNLFKLITISHTQTFYRVPRIRRSDLQKLRQG
LIIGSGCSNGELFETMMNKTPEEAERIAQFYDYLEVMPKPVYSQLVDGGTVHDEWALEDI
IRRIVKLGKKLNLPVVATGNVHYLHETDAKFRQILIGSMGGANPLNRQPLPQVHFRTTDD
MLKEFDFLGPDLAKEVVVKNTQLVADMIGDVKPIKDDLYTPKIEGSDDEVTNLTYEMAHE
IYGETLPEIVQARIDKELKSILGHGFGVIYLISAKLVKKSLADGYLVGSRGSVGSSLVAT
FMEITEVNPLPPHYVCPNCKHSEFIADGSVASGYDLPNKECPECGAHYKKDGQDIPFETF
LGFKGDKVPDIDLNFSGEYQPQAHNYTKVLFGEDYVFRAGTIGTVAEKTAYGYVKGYGND
HGITYRNAEVDRLVQGCTGVKRTSGQHPGGIIVVPDYMDIYDFTPVQFPADAQDSEWKTT
HFDFHSIHDNILKLDILGHDDPTVIRMLQDLSGIDPKTIPTDDPIVMEIFSSTKSLGVTE
KQIGTKTGTLGIPEFGTKFVRQMLEETKPSTFSELVQISGLSHGTDVWLGNASDLIKDGT
CVLAEVIGCRDDIMVYLIYQDLEPSFAFKIMESVRKGKGLSDDMEAEMRAKKVPEWYIDS
CKKIKYMFPKAHAAAYVLMAVRIAWFKVHHPILYYAAYFTVRASDFDLIAMTQGSVMIRK
KVDEINMKGLDAAPKEKSLLTVMEIALEMCERGMTFKKIDLYRSQASEFIIEGNSLIPPF
DAIPGLGTNVAKQIVEARKNGEFLSKEDLQQRGRVSKTLIEYMDELGCLEGMPDANQLSL
F
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
ttggcacaacaggaggcaaaacaaaagttcttacttctgttacaacaacttgaactaaca
gatgacgtctatatgtccttctttgaaaaaggtgagctcgaacgagtaacggtccataaa
aagaaacgtgtatggcattttaaaataaaggttaacaatattttgcccttcgaagtatat
caactattacgagcgcggatggcagaaaagttttctcatatcgcgtcggtttcactaaca
attgattcttttaatcccattgttaatgagcagcatattttagattattggtaccctacg
atcgaacaaatttcagatatgtcgcctttattacgtgaaaatttatcacaacaagtacct
aagtggacaggtcataagcttgtcgtcacttcgatgctagaagtagaatatttatcattg
aaggcgaaatatacggataagattgcagaatcttatcgcgcatttggttttccgcatatc
ccactagaattcaagcttgtagaagaatcggaagaatttattgcacaacaagaagcattc
tatatgcaacgacaagtagaagaagagcgattatcgaaacaggcaatggcggattttgca
atgcgtgaaaaggaaaagtcggacaatccaggtgcggtaacaagcgatgcaccattccaa
ttaggctcttttatcaaaaatgcagaatcggctgatattcgaactattttagaagaagag
cgttccattatcattgaaggatttatttttgcggtagatattaaggaattacgaagtggc
cgctcacttcttgagatgaaagtatcagattatacggattccttaatggtgaaaatgttc
tctaatagcgatgaagatgttgcgaaaatgaacatgattagtaaaggtatgtgggtaaga
ctacgtggctcgatccaaatggatacattcgcacgtgatttagtcatgatggtaaaagat
attaatgaaatcaaaaaagagccacgtaaagattatgcaccagaaggcgaaaagcgtgtg
gaattgcatttacatacgccgatgagccaaatggatgcgatgacacccgtcgacaaatta
gtagcacaggccgcaaaatggggacaccctgccattgccataacagaccatgccgttgtt
caatctttcccagaagcctattctgctggaaagaaaaatggcattaaagtcatttatggt
gtagaggcaaatttagtagacgacggtaagccaattgcctacgatccgattgattcatta
ctcgaggatacgacctatgttgtatttgacgtagaaacaacgggcttttcaaatgtgtat
gataccattattgaattagcggcagttaaaatcaaaaatggccaagtactggatacgttt
gagcgcttttcgaatccacaccgtaaattaacggcgaaaattatagaattgacacatatt
acggatgatatgctcgtgaatgcaccggaaattgaggaagtcattaaagaattccatgat
tttattggcgatgcagtagtagtagctcataatgcggcatttgacttaggcttcctctat
gtagcttataaaaaagctggcttggagcatgttcgtcatccagggattgatacggttgag
ttatcacgcttagttaatcccgcacaaaaatcacatagcttaaaaacgttaacgaaaaaa
tacaatattgaattaacgcaacatcaccgtgcgatttatgacacggaagcgacaggggaa
ttattgcttcatttactgaagcaaacagctgatttaggcattcaaaatttaaatgaatta
aatgaccatgtaggtggtgaagaaggttataaacaagcgcgtccaagccactgtacgatt
ttagccgtagatgatgcgggattgaaaaatttgtttaagctaattaccatttcccacacc
caaacattttatcgtgtaccacggatacgtcgttcggatttacaaaagctacgtcaaggt
ttgattatcgggtcaggttgttcgaacggtgagttattcgaaacgatgatgaataaaaca
ccagaggaagcggaacgaattgcgcagttttatgattatttagaagtgatgccaaaacca
gtttattctcagcttgttgatggtggtacggtgcatgatgaatgggcattagaagatatt
attcgccgcattgtcaagctagggaaaaaattaaatttgcccgttgtcgcaacaggaaat
gtgcattatttacacgaaacggatgcaaagttccgtcaaattttaattggctctatgggt
ggggcaaatccattaaatcgccagcctttaccgcaagttcatttccgtacaacggatgat
atgttgaaggaatttgattttttaggacctgatttagcaaaagaggtcgttgtgaagaat
acgcagctcgttgccgatatgatcggtgatgtgaagccgattaaagatgacctatatacg
ccgaaaattgagggttctgatgatgaggtaacaaatttaacgtatgaaatggcgcatgaa
atatacggagagactttaccggaaattgtgcaagcgcgtattgataaggaattaaaatca
attttaggtcatggcttcggagtaatttatttaatttcagcaaagctcgtgaaaaagtca
ctagcggatggctatttagttgggtcacgtggttcagtaggctcgtcacttgtggcaacc
ttcatggaaattaccgaagtgaatccattgccaccgcattatgtatgtccgaactgtaag
cattccgaatttattgcagatggttccgtcgcatcaggctatgacttgccgaacaaagaa
tgtcctgaatgtggcgcgcattataaaaaagacgggcaagacatcccgtttgaaacattc
ctaggattcaaaggagataaggtacccgacatcgatttgaacttctcaggtgagtaccaa
ccacaagcccataactatacgaaagtactgtttggggaggattatgtattccgtgcaggt
acaattggaaccgttgccgaaaaaacggcttatggatatgttaaaggttatggcaatgat
catggcatcacctatcgcaatgcagaagtggacagacttgtacaagggtgcaccggagta
aagcgaacttcaggacaacacccagggggaattattgttgtaccagattatatggatatt
tatgattttacaccagtacaattccctgcagatgcacaagattcagagtggaaaacaacg
cattttgatttccactcgattcacgataatattttgaaacttgatattctagggcacgat
gatccgacggttattcgtatgctacaagatttatcaggaattgacccgaaaactattccg
acagatgacccgattgttatggaaatctttagttcaacgaaatctcttggtgtaacggaa
aagcaaattggaacaaaaacagggacgcttggtattcctgagttcgggactaagttcgtt
cgccaaatgcttgaagaaacgaagccatcaacatttagtgagctcgtgcaaatttcagga
ctgtcacacggaacggacgtatggttaggaaatgcttctgatttgattaaagatggcaca
tgtgttttggccgaagtaattggttgtcgtgatgacattatggtgtatttaatttaccaa
gatcttgagccatcctttgcctttaaaattatggaatccgtacgtaaagggaaaggttta
tccgatgatatggaagccgaaatgcgtgcgaagaaagtgccggagtggtatatcgattct
tgtaaaaagataaaatatatgttccctaaagcccacgcagctgcctatgttttaatggcg
gtacgtattgcttggtttaaagtgcatcacccaattttatattatgctgcgtactttaca
gtgcgagcatctgattttgatttaattgctatgacgcaaggctctgtcatgattcgcaaa
aaagtcgatgaaatcaatatgaaaggtttggatgcggcgcctaaagagaaaagtttatta
accgtgatggaaattgctttagaaatgtgtgagcgtggaatgacctttaagaagattgat
ttatatcgttctcaagcaagtgaatttatcattgaaggcaattcgttgattcccccattt
gatgcgattccaggacttggaacaaacgttgcaaaacaaattgtcgaagcacgtaaaaac
ggtgagttcttgtcaaaagaagatttgcaacaacgtggacgtgtatcgaaaacattgatt
gaatatatggatgaacttggttgtttagaaggaatgccagatgcaaaccaattatcgctt
ttctaa
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