Solibacillus sp. R5-41: CSE16_04690
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Entry
CSE16_04690 CDS
T05144
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE16_04690 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sob03019
]
CSE16_04690 (pnp)
03016 Transfer RNA biogenesis [BR:
sob03016
]
CSE16_04690 (pnp)
Enzymes [BR:
sob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CSE16_04690 (pnp)
Messenger RNA biogenesis [BR:
sob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSE16_04690 (pnp)
Transfer RNA biogenesis [BR:
sob03016
]
Prokaryotic type
tRNA degradation factors
CSE16_04690 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
SPATA25
KH_2
PspAA
Inos-1-P_synth
Motif
Other DBs
NCBI-ProteinID:
ATP39397
UniProt:
A0A2D1SQL2
LinkDB
All DBs
Position
1015207..1017318
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AA seq
703 aa
AA seq
DB search
MNEKKVFSYEWAGRPLVIEVGQLAKQANGAALVRYGETAVLSTATMSKSPKALDFFPLTV
NYEEKLYAAGKIPGGFIKREGRPSESAILASRLIDRPIRPMFPDGFRNEVQVISMVMSND
QNNPSDVAAMFGSSLALAVSNIPFDGPIAGVHVGYVDGEFVINPTVEQAAKSTIQLTVAG
NKDGINMVEAGALEVTEEIMLEAIMFGHEEIKNLIAFQEEIVAAVGKEKVEVVLYELDAQ
LTADIKAACETEMNTAIQTVEKHAREEAINVVKERIITSYVEQEVTDETMKQVKGILDQM
VKDEVRRLITEDKVRPDGRKLDEIRALSSEVGLLDRTHGSALFTRGQTQALSICTLGALG
DVQIIDGLGVEESKRWMHHYNFPQFSVGETGPIRGPGRREIGHGALGERALLAVIPDEET
FPYTIRCVSEVLESNGSTSQASICASTLAMMDAGVPLKAPVAGIAMGLIKKDEHYSILTD
IQGMEDHLGDMDFKVAGTAKGVTALQMDIKIDGLSRNILEEALTQAKIGRMHILQSMLAT
LTESRTTLSKYAPKITVIKINPDKIRDIIGPGGKQINKIIDETGVKIDTEQDGTIYIASS
DESMINRAREIIESIVREAKVGEYYMSTVKRIEKFGAFCEIFPGKDGLLHISEIQEERTK
AVEDVLKLGDQLLVKCIEIDNQGRVNLSRKIVVKEEKERAEQA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaaaaaaaggtcttttcgtatgaatgggctggccgtccactagtaatagaagtt
ggacagttagcaaaacaagcaaatggtgcagcacttgtgcgctatggcgaaacagcagta
ttatcaacagcaacaatgtcaaaatctccaaaagcattagatttcttcccattaacagta
aactatgaagaaaaactatacgcagctggtaaaatcccaggtggttttattaaacgtgaa
ggacgtccatcagagtcagctattttagcctctcgtttaatcgaccgtccaatccgtcca
atgttcccagatggcttccgtaacgaagtacaagttatttcaatggttatgtcaaatgac
caaaacaatccttcagatgtagcagcaatgtttggatcttcattagcattagctgtatct
aatattccttttgacggaccaattgcaggcgtacatgttggatatgttgatggcgaattt
gtgatcaacccaacagtagagcaagctgcaaaatcaacgatccaattaacagtagcaggt
aataaagacggcatcaacatggttgaggcaggtgcattagaagtaacagaagaaatcatg
cttgaagcaatcatgtttggtcatgaagaaatcaagaacttaatcgctttccaagaagaa
attgtagcagcagttggaaaagaaaaagtagaagtggtactttacgaattagatgcacag
ttaacagcggacattaaagcggcttgtgaaacagaaatgaacactgcgattcaaacagtt
gaaaagcatgcacgtgaagaagcgatcaatgttgtcaaagaacgcatcatcacttcttat
gtagagcaagaagtaacggacgaaacgatgaagcaagtaaaaggcattttagatcaaatg
gtcaaagatgaagttcgtcgtttaattacggaagataaagtacgtccagatggtcgtaaa
ttagatgaaattcgtgcactttcttctgaagttggtctattagatcgtacacatggttca
gcactattcacacgtggtcaaacgcaggcactttcaatctgtacattaggtgctttaggc
gatgtgcaaattattgatggtcttggtgttgaagagtcaaaacgttggatgcaccattat
aacttccctcaattctcagtaggggaaacaggtccaattcgtggtccgggtcgtcgtgaa
atcggtcacggtgcattaggtgagcgcgcattactagcagttattccagatgaagaaaca
ttcccatatacaattcgttgcgtatcagaagttttagaatctaacggttcaacttctcaa
gcgtcaatttgtgcatcaacattagcaatgatggatgcaggtgttcctttaaaagcaccg
gtagcaggaattgcgatgggtcttattaaaaaagacgagcactactctattttaacagac
attcaaggtatggaagatcaccttggtgacatggactttaaagttgcaggtacagctaaa
ggtgtaacggcacttcaaatggacattaaaattgatggtttatcacgcaatattttagaa
gaagcgttaacacaagcgaaaatcggccgtatgcatattttacagtcaatgcttgcaaca
ttaacggaatcacgtacaacgctttcaaaatacgcaccaaaaattacggttattaaaatc
aatccagataaaatccgtgatattatcggacctggtggtaaacaaattaataaaattatt
gacgaaacaggcgtaaaaattgatacagagcaagatggtacaatttatatcgcttcatca
gatgagtcaatgattaaccgtgctcgtgaaattattgaatcaatcgtacgtgaagcaaaa
gttggcgaatactacatgtcaacagttaaacgtatcgaaaaattcggtgcattctgtgaa
atcttcccaggtaaagatggtttactacacatttcagaaattcaagaagaacgtacgaaa
gcagtagaagacgtattaaaattgggcgatcaattacttgtaaaatgtatcgaaattgac
aatcaaggacgagtaaacttatctcgtaaaattgttgttaaagaagaaaaagaacgtgca
gagcaagcataa
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