KEGG   Solibacillus sp. R5-41: CSE16_04940
Entry
CSE16_04940       CDS       T05144                                 
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
sob  Solibacillus sp. R5-41
Pathway
sob00521  Streptomycin biosynthesis
sob00523  Polyketide sugar unit biosynthesis
sob00525  Acarbose and validamycin biosynthesis
sob00541  Biosynthesis of various nucleotide sugars
sob01100  Metabolic pathways
sob01110  Biosynthesis of secondary metabolites
sob01250  Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:sob00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CSE16_04940 (rfbB)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CSE16_04940 (rfbB)
   01055 Biosynthesis of vancomycin group antibiotics
    CSE16_04940 (rfbB)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CSE16_04940 (rfbB)
   00525 Acarbose and validamycin biosynthesis
    CSE16_04940 (rfbB)
Enzymes [BR:sob01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     CSE16_04940 (rfbB)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase Polysacc_synt_2 3Beta_HSD RmlD_sub_bind NAD_binding_4 NmrA NAD_binding_10
Other DBs
NCBI-ProteinID: ATP39444
UniProt: A0A2D1SQR0
LinkDB
Position
1074898..1075917
AA seq 339 aa
MKEKKILVTGGAGFIGGNFVQYMVEKYPEYDVFNLDNLTYAGDLTKHSLIEMKNNYNFIK
ADIVDDRLIMSIFEKEKFNYVVHFAAESHVDRSITNPGIFVQTNVIGTQVLLEAAKRVGI
TKFVHISTDEVYGELDFDPTTFFIEETPLKPNSPYSASKASSDLLVRAYHETYGLPINIT
RCSNNYGPFHFPEKLIPLTISRVLTDEKVPVYGEGQNIRDWLHVFDHCAAIDLVLHKGVN
GEIYNIGGHNERTNLEVVRTIIQALGKSEELIEFVEDRLGHDKRYAIDSAKLKQLGWKPS
YTFETGIIQTVQWYVENEVWWKQIINGQYLTYFNKQYSL
NT seq 1020 nt   +upstreamnt  +downstreamnt
atgaaagagaaaaaaattctcgttactggtggagctggcttcatcggaggaaattttgtt
caatacatggttgaaaaataccctgaatatgatgtttttaacttagataatttaacgtat
gccggtgatttaacaaaacatagcctgattgaaatgaagaataactacaactttataaag
gctgatattgtagatgataggttgataatgtctatttttgaaaaagaaaaattcaattat
gtcgttcattttgctgcagaaagtcatgtggaccgttccattacaaatcccggtattttt
gtacaaacaaatgttataggtactcaagtcttattggaggcagcaaagcgagtaggtatt
acaaaatttgttcatatatcaacagatgaagtttacggggagttagattttgacccgacg
accttttttatagaagaaacaccattaaaaccaaatagcccatatagcgctagtaaagca
tcttcagatttactagttagagcgtatcacgaaacatatggtttacccattaatattacg
cgttgttcgaataactacggtccattccattttccagaaaaattaattcctttaaccatt
tctcgcgtattaactgatgaaaaggttcctgtatatggggaagggcaaaatatccgagat
tggttacatgtatttgatcattgcgcggcaattgatttagttttgcataaaggtgtgaat
ggagagatttataatataggtggtcataatgaacgtactaatttagaagtggtgagaaca
attattcaagcgttaggaaaatcagaagaattaattgagtttgtcgaagatcgtttagga
catgataagcgttatgccattgattcagcgaagttaaaacaattaggctggaaaccctcc
tatacatttgaaacaggaattattcaaacagttcaatggtatgttgagaacgaggtatgg
tggaagcaaattattaatggtcaatatctgacatatttcaacaagcaatattcgttgtga

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