Solibacillus sp. R5-41: CSE16_04940
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Entry
CSE16_04940 CDS
T05144
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob00521
Streptomycin biosynthesis
sob00523
Polyketide sugar unit biosynthesis
sob00525
Acarbose and validamycin biosynthesis
sob00541
Biosynthesis of various nucleotide sugars
sob01100
Metabolic pathways
sob01110
Biosynthesis of secondary metabolites
sob01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CSE16_04940 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CSE16_04940 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CSE16_04940 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CSE16_04940 (rfbB)
00525 Acarbose and validamycin biosynthesis
CSE16_04940 (rfbB)
Enzymes [BR:
sob01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CSE16_04940 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
NmrA
NAD_binding_10
Motif
Other DBs
NCBI-ProteinID:
ATP39444
UniProt:
A0A2D1SQR0
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Position
1074898..1075917
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AA seq
339 aa
AA seq
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MKEKKILVTGGAGFIGGNFVQYMVEKYPEYDVFNLDNLTYAGDLTKHSLIEMKNNYNFIK
ADIVDDRLIMSIFEKEKFNYVVHFAAESHVDRSITNPGIFVQTNVIGTQVLLEAAKRVGI
TKFVHISTDEVYGELDFDPTTFFIEETPLKPNSPYSASKASSDLLVRAYHETYGLPINIT
RCSNNYGPFHFPEKLIPLTISRVLTDEKVPVYGEGQNIRDWLHVFDHCAAIDLVLHKGVN
GEIYNIGGHNERTNLEVVRTIIQALGKSEELIEFVEDRLGHDKRYAIDSAKLKQLGWKPS
YTFETGIIQTVQWYVENEVWWKQIINGQYLTYFNKQYSL
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaagagaaaaaaattctcgttactggtggagctggcttcatcggaggaaattttgtt
caatacatggttgaaaaataccctgaatatgatgtttttaacttagataatttaacgtat
gccggtgatttaacaaaacatagcctgattgaaatgaagaataactacaactttataaag
gctgatattgtagatgataggttgataatgtctatttttgaaaaagaaaaattcaattat
gtcgttcattttgctgcagaaagtcatgtggaccgttccattacaaatcccggtattttt
gtacaaacaaatgttataggtactcaagtcttattggaggcagcaaagcgagtaggtatt
acaaaatttgttcatatatcaacagatgaagtttacggggagttagattttgacccgacg
accttttttatagaagaaacaccattaaaaccaaatagcccatatagcgctagtaaagca
tcttcagatttactagttagagcgtatcacgaaacatatggtttacccattaatattacg
cgttgttcgaataactacggtccattccattttccagaaaaattaattcctttaaccatt
tctcgcgtattaactgatgaaaaggttcctgtatatggggaagggcaaaatatccgagat
tggttacatgtatttgatcattgcgcggcaattgatttagttttgcataaaggtgtgaat
ggagagatttataatataggtggtcataatgaacgtactaatttagaagtggtgagaaca
attattcaagcgttaggaaaatcagaagaattaattgagtttgtcgaagatcgtttagga
catgataagcgttatgccattgattcagcgaagttaaaacaattaggctggaaaccctcc
tatacatttgaaacaggaattattcaaacagttcaatggtatgttgagaacgaggtatgg
tggaagcaaattattaatggtcaatatctgacatatttcaacaagcaatattcgttgtga
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