Solibacillus sp. R5-41: CSE16_05225
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Entry
CSE16_05225 CDS
T05144
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CSE16_05225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_05225
Enzymes [BR:
sob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
CSE16_05225
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CSE16_05225
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ATP39500
UniProt:
A0A2D1SQV5
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All DBs
Position
1134575..1135462
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AA seq
295 aa
AA seq
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MLLGSHVSMSGKKMLLGASEEALSYGANTFMIYTGAPQNTRRKPIEELNIAKGLMHMQEH
GMSNIVVHAPYIINLGNTTKPETFELGVNFLQEEIKRTAALEAKQIVLHPGAHVGAGVDA
GIARIVEGLNEVLSQDYPVQIALETMAGKGTEIGRNFEELARIFDGVTNNERLSVCFDTC
HTHDAGYDVVNDFDGVLNEFDKIIGLDRLKVLHINDSKNVRGAGKDRHENIGFGELGFEA
MNYIVHHPQLMHVPKILETPFVGADAKNKQAPYKEEIAMLRDGKFQPELIDAMRG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaggttctcacgtatccatgagcggtaagaaaatgttacttggtgcaagtgaa
gaggcactttcttatggagcgaatacattcatgatttatacaggtgcgccgcaaaatacg
cgccgtaagccaattgaagaattgaatattgcgaaaggtcttatgcatatgcaagaacat
ggcatgagcaatattgtcgtccacgcgccatatattattaatcttggaaatacgacaaaa
cccgaaacgtttgagcttggtgtaaatttcctgcaagaagaaattaaacgtactgcagca
ctagaagcaaaacaaattgtcttgcatccaggtgcgcatgtcggtgcaggagtagacgct
gggattgcgagaattgtggaagggttaaatgaagtactttcacaagattatccagttcaa
attgcactggaaacgatggctggcaaaggcactgaaatcggccgcaattttgaagagctt
gcgcgtatttttgatggtgtaacgaataacgaacgattatccgtttgtttcgatacatgt
catacacatgacgcaggctatgatgtcgtaaatgattttgatggtgtattaaatgaattc
gacaaaattattggcttagatcgattaaaagtactgcacattaatgattccaaaaacgta
cgtggtgctgggaaagaccgtcacgaaaacattggttttggtgagcttggttttgaggcg
atgaactatattgtgcatcacccacagttaatgcacgtaccgaaaattttagaaacgcca
tttgtaggggcagacgcgaaaaataagcaagcgccttataaagaagaaatcgccatgctg
cgagatggcaagttccaaccagagctaatcgacgcaatgcgcgggtag
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