Solibacillus sp. R5-41: CSE16_05345
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Entry
CSE16_05345 CDS
T05144
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob00550
Peptidoglycan biosynthesis
sob01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CSE16_05345 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sob01002
]
CSE16_05345 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sob01011
]
CSE16_05345 (dacB)
Enzymes [BR:
sob01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CSE16_05345 (dacB)
Peptidases and inhibitors [BR:
sob01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
CSE16_05345 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sob01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
CSE16_05345 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
M64_N
FlaG
Motif
Other DBs
NCBI-ProteinID:
ATP39521
UniProt:
A0A2D1SR05
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All DBs
Position
1162979..1164397
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AA seq
472 aa
AA seq
DB search
MKKVVSFILLITLCVALPLQSFASISDAVTKNLGNGNVAVTIRDKQTGKIIYEHNGEKLM
RPASNMKLLTGAAALDILGEDYRFSTELYIDGVIINKELNGNLYIKGTGDPTLNKDDFLA
FAKALKNQGISKINGNIIGDDTYFSGNTLPPGVDKIDESYYFGARTSAITMSQNLDFDAS
TVIITATPGKVGTKPSYEIIPNLSGMTIANEAKTVSKGQKNTIKIERSYNTNRIIISGNL
PQGSSKKEWVTLQDPTKNTLQAIQLTLQGAGIQFAKNTQIKTAQVPADAKFIHMKKSRTL
SAIFPAFMKLSNNSIADILVKSMGQQQQAKGSLTAGLQVMQEYGKALNISMGTWILADGS
GLSDRNRLTANGLSSLLYEVQQKSYFQTFYQSLPVAGHEERLVGGTLRKRFKTSDVKGKI
NAKTGYIPNVNTLAGYVTGKSGKTYIFTILLENRSNGTVHMDRMMADIMKNL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaagtcgtttcttttattttgttaatcacattatgcgttgcgcttccactgcaa
tctttcgcttccattagtgatgcagttacgaaaaatttagggaatggtaatgtagctgtg
acaattcgtgataagcaaacagggaagataatttatgagcacaatggcgaaaaattgatg
cgtcctgcctccaatatgaaattattaactggtgcagctgcgcttgatattttaggagaa
gattatcgtttttcaacggaattatatattgacggggtaatcattaataaagaactaaat
ggcaatctatacataaaagggacgggtgatccgacattaaataaggatgattttctagca
tttgcaaaggcattaaaaaatcaaggtatttccaaaattaatggaaatatcattggtgat
gatacgtacttttctggtaatactttgccaccgggtgtagataaaattgatgaatcctac
tactttggagcgcggacgtcagcgattacgatgtcacaaaatctagactttgatgcaagt
accgtcattattacagcaacacctggtaaagttggaacgaagccaagctatgaaattatc
ccgaatctaagtggaatgaccattgcgaatgaagccaaaactgtttcaaaagggcaaaaa
aatacgataaaaattgagcgctcatataatacgaatcgcataattatttcgggtaattta
ccacagggaagtagtaaaaaggaatgggtaaccctgcaagacccaactaaaaatacgcta
caagcaatccaattaacacttcaaggtgcaggcattcaatttgcaaaaaatacgcaaatt
aagacagcacaggtaccagccgatgcaaaatttattcatatgaaaaaatctcgtacattg
tcggcgattttccctgcctttatgaagctaagtaataatagtattgcggatattttggtg
aaatcaatgggacagcaacaacaagcgaaagggagcttaacggctggtttacaagtaatg
caggaatatgggaaagcgttaaatatttcaatgggaacttggatattggctgatggttcg
ggcttatctgatcgaaatcgtttgacagcgaatggcttgtcttcattattatatgaggtg
cagcaaaaatcgtatttccaaacattttatcaatcacttcccgtagcaggtcatgaggag
cgtctcgttggtgggacgttgcgaaaacgctttaaaacaagtgatgtaaagggaaaaata
aatgcgaaaacgggttatattccgaatgtgaatacgttagcaggctatgtaacggggaaa
agtggtaaaacgtatattttcactatcttattggaaaaccgttcaaatggaaccgtgcat
atggatcgtatgatggctgatatcatgaaaaatttataa
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