Solibacillus sp. R5-41: CSE16_05800
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Entry
CSE16_05800 CDS
T05144
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE16_05800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sob03019
]
CSE16_05800
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_05800
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSE16_05800
Messenger RNA biogenesis [BR:
sob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSE16_05800
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSE16_05800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
ATP39602
UniProt:
A0A2D1SR64
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All DBs
Position
1249166..1250611
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AA seq
481 aa
AA seq
DB search
MQLEQYLQQYFGYENFRPGQKEVLEQLIAGKDVIALLPTGMGKSLCYQLPGYVFDKSVLI
ISPLLSLMQDQVDQLKQMGEKRVIALNSFLTPAQKNYALHFLHEYRFIFISPEMLLQPQV
KARLASLELSLIVADEAHCISQWGYDFRPDYLRIGEVIQVTNRPPVLALSATATTKVLHD
IDHYLEMESPFIYVHSVDRPNIHLVKKPFAIKEDKLTWILEHVEKTTGPGIIYTQSREKT
ERISLLLLQRGISAAAYHAGKEMQDRQFIQHQFLSGQLDWIVATNAFGMGIHKNNVRQII
HESMPSTVANYMQEIGRAGRDGKDAVAFLLYCEGDEQYAKFIVSEDLPKEFHVDRYTRYV
ANGEQPSVMFSNGEISEVSFRVLNYWMEREDVEQVKKRLVNMQMAKFEEVMAMMKIVETN
ACMRELLINYFGQQVEEKHENCCSNCGVELSVLLQERVEPKSQNQMTDWKGRLQQILLRN
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgcaattggaacagtatttacaacaatattttggctatgaaaatttccgtccaggacaa
aaagaggtactcgaacaattgattgcaggcaaagatgtgattgccttattgccaacggga
atggggaaatccctttgttatcagctacctggctatgtatttgataagtctgtattaatt
atttcaccgttgttatctttaatgcaagatcaagtcgaccagttaaagcaaatgggtgaa
aaacgtgtcattgcacttaattcttttttaacgcctgcgcaaaaaaactatgccttacat
tttttgcatgagtatcgctttatttttatttcaccagaaatgctgttgcagccgcaagta
aaagcaaggttagcaagcttggaactgtcattaatcgtcgcggatgaagcgcattgtatt
tcacaatggggctatgattttcgtccagactatttacgaattggtgaagtcattcaggta
acgaatcgcccacctgtactagcgttatctgctacagcgacaacgaaagtattacacgat
attgaccattatttagaaatggaaagtccttttatttatgtccattctgttgatcggcca
aacattcaccttgtaaaaaagccatttgccattaaggaagataaattgacctggatttta
gagcatgttgaaaagacaacaggaccaggcattatttatacgcagtcaagggaaaaaaca
gaaagaattagtttattgttattgcagcgtggcatttcagcggcagcttatcatgcaggg
aaagaaatgcaggatcgccagtttatccagcatcagtttttatctgggcaactggattgg
attgtggcaacgaatgcatttggtatggggatacataaaaataatgtgaggcaaattatc
catgaatctatgccgtcaacggtcgcgaattacatgcaagaaatcggacgtgctggtcgt
gatggtaaagatgccgttgcttttttattgtattgcgaaggcgacgagcaatatgcaaag
tttatcgtatctgaagacttgccaaaggaattccatgtagaccgttatacgcgttatgta
gcaaacggtgaacagcctagtgtcatgttttcaaatggcgaaatttcagaagtatcgttt
cgagttttaaattattggatggaacgggaagatgttgaacaagtgaaaaagagactggtt
aacatgcaaatggcaaagtttgaagaagtgatggcaatgatgaaaattgtcgaaactaat
gcatgtatgcgggaacttttaataaactatttcggtcaacaagtagaagaaaagcatgaa
aactgttgtagtaattgtggtgttgagctttcagtgttattacaagaacgtgtggagccg
aaaagtcaaaatcaaatgactgattggaaagggcgacttcaacagattttgctgcgaaac
ttgtaa
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