Solibacillus sp. R5-41: CSE16_09395
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Entry
CSE16_09395 CDS
T05144
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE16_09395 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sob03019
]
CSE16_09395 (recQ)
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_09395 (recQ)
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSE16_09395 (recQ)
Messenger RNA biogenesis [BR:
sob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CSE16_09395 (recQ)
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CSE16_09395 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
DUF7120
DUF4953
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ATP40240
UniProt:
A0A2D1ST31
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All DBs
Position
1966159..1967925
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AA seq
588 aa
AA seq
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MLNLALQQLKTYFGYDAFRPGQSNVIENVLNRNDTLVIMPTGGGKSLCYQIPALCLDGTT
IVISPLISLMKDQVDMLVSSGIEAAFINSSLSFEEVQNVMYRVRSGQIKLLYIAPERLEN
ERFCQELAQIQVPILAIDEAHCISQWGHDFRPSYRTIQKLLTLWENKPTILALTATATKE
VGQDIRELLSIEQQSTFITGFERDNLKFSVLLGENKESFIKSFIKNNANEAGIIYASTRK
SVEAVYELLARAGVKVAKYHGGMAEEDRTYEQNRFLNDEVQIMIATNAFGMGINKTNVRF
VLHYNMPRNIESYYQEAGRAGRDGLPSECILLYASADEQTQRFLIDQAQDRSRIPMELTK
LHKMIDYCHTEQCSQRYIVDYFDDEQSHSDCGRCANCLDERPKQDVTEDAQKVLSCIVRM
GQKFGKQITASVLAGSRSKKVLEFSFEKLPTYGILRHMNAKEIASFIEFLIAEKLIQVSN
GQFPILYISDEGKTVLMGKQQVLRKAMLPIKTVFEENDPLFEVLRKIRKEIADQEKVPPF
VVFSDKSLKDMCVRRPKTSTQFLEVSGVGESKLEKYGKTFVDAIKAYE
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgttaaatcttgcattgcaacaattgaaaacgtattttggctatgatgcatttcgtcca
ggacaatccaatgtgatcgaaaatgttttaaatcgcaatgacacgctggtgattatgcca
acaggtggcgggaaatcactttgttatcaaattccagcactttgtttggatgggactaca
atcgttatttcaccacttatttcactgatgaaagaccaggtggatatgcttgtgtccagt
ggaattgaggcggcgtttattaatagctcattaagctttgaggaagtacaaaatgtgatg
taccgcgtgagaagtgggcaaattaagctgttatacatagcgccagagcgtttagaaaat
gaacgattttgccaggaacttgctcaaattcaagtgccaatccttgcgattgacgaggca
cattgtatttcgcaatggggacatgatttccgtccgagctaccgaacaattcaaaaacta
cttactttgtgggaaaataagccgacaatccttgcgttaactgcaacagctacaaaggaa
gttggccaagatattcgtgaattattaagcattgaacagcagagcacatttattaccggc
ttcgaacgcgataatttaaagttttcggtattgcttggcgaaaataaagaatcatttatt
aaaagtttcattaaaaataacgcgaatgaagcaggaattatttatgcctcaacacgtaaa
tcagtcgaggcggtctatgagctgctggcaagagctggggtgaaggtcgctaaatatcat
ggtgggatggctgaagaggaccgaacatatgagcaaaaccgcttcttaaatgatgaagtg
caaattatgattgcgacaaacgcttttggaatggggattaataagacgaatgtgcgcttt
gtccttcattacaatatgccgcgcaatatcgaaagctattatcaggaagcggggcgggca
ggacgtgacgggctaccgagtgaatgtattttactgtatgcgtcagcggatgagcaaaca
cagcgttttttaatagaccaagcacaggatcgatcgagaattccaatggagctcactaag
ctgcataaaatgattgactattgtcatacagagcaatgctcacagcgctatattgtagac
tattttgatgatgagcaaagtcattcggactgtggtcgttgtgcgaattgcttggatgaa
cgcccaaagcaggatgtcactgaggatgcacaaaaagttttgtcctgtatcgtgcgcatg
ggacaaaaatttggtaagcaaataacagcctctgtattggcaggctctcgaagtaaaaag
gtattagagtttagctttgaaaagttgccgacgtatggaattttacgacatatgaatgct
aaggaaattgccagctttattgagtttttaatcgctgaaaagctcattcaagtgagtaat
gggcaatttccaatcttgtatatttccgatgaggggaaaacggtgttaatgggtaagcaa
caggtgctgcgcaaggcaatgttgccaattaaaacggtctttgaggaaaatgatccgcta
tttgaagtgttacgaaaaattcgtaaggaaattgccgatcaagaaaaggtgccaccattc
gttgtcttttcagataaatcactaaaggatatgtgtgtacgtcgtccgaaaacgagcaca
caatttttagaagtaagcggtgttggcgaaagtaagttagagaaatacggaaaaacattt
gttgacgcgattaaagcgtatgaatag
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