Solibacillus sp. R5-41: CSE16_13540
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Entry
CSE16_13540 CDS
T05144
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03420
Nucleotide excision repair
sob03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CSE16_13540
03430 Mismatch repair
CSE16_13540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_13540
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CSE16_13540
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CSE16_13540
MMR (mismatch excision repair)
Other MMR factors
CSE16_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_22
Viral_helicase1
PhoH
DEAD
AAA_16
AAA_30
SLFN-g3_helicase
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ATP40994
UniProt:
A0A2D1SV67
LinkDB
All DBs
Position
complement(2762876..2765212)
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AA seq
778 aa
AA seq
DB search
MNLQFQQEQKRVDDVMEVITEQINHLEKETSKRRNEVIHIRKHFWDEIKVNADTFDDFLE
TIISLRQETQALSVSQSTHKHASKKLDTLHRMQKIPYFGRIDFMEEGHSNQEQVYIGISS
LMDESGEDFLIYDWRAPISSVYYDYEPGLAHYATPGGIVQGQLKKKWQYLVRDGVLQSMF
DTSLTIGDEILQQVLGNGTDKHMHSIVSTIQQEQNQIIRHDHGRLLVVHGAAGSGKTSAA
LQRIAYLLYKYRASLTADQIILFSPNAMFNSYVSNVLPELGEENMQQVTFQEYLDHRLSN
ELQVENPYDQLEYVLTGTNTPAHQSRVTGIQFKASTVFFEVIKAYRQSLEVRGMLFKDII
FRGQPIVTAQQLADKFYSSDPTIHFQNRLENLKDWVLKLVKDAGKVERMKPWVQEEIELF
SNEDYYKAQTYLAKKRGFARDSIADYEMEPEALERLVVTQKLSPLRKRIRAFDFVDILGI
YKQLFADPLQINEWIEGETPAEWNAICRATLEVLDEGKLFYEDATPFLLMKELIQGFQTN
RSIKHILIDEAQDYSPFQFEFIKRLFPSARMTVLGDFNQAIFAHASEMVDFHVLSSLYGQ
DETAVINMTRSYRSTKPIIDFTRKLVPNGEKIIPFERDGALPVLTQVIDHEQLHRSILSK
VAALQSAGYISIAIICKSAEESKNAYEALSSIDGIKLLKNGSPEYEQGVVVIPSYLAKGI
EFEAVIIYDASEKVYGDESLRRIFYTACTRAMHELQLYSVGEPSPFLRNALQGSFIQV
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaatttacaatttcagcaggagcaaaaacgagtggacgatgtaatggaggtcattaca
gagcaaattaaccatttagaaaaagaaacatctaagcgccgcaacgaagtcattcatatt
cgcaaacatttttgggatgaaattaaggtaaacgccgatacttttgacgattttttagaa
acgattatcagcttgagacaagaaacgcaagcattgtctgtcagtcaaagcacacataaa
catgcatccaaaaaattggatacgctacaccgtatgcagaaaattccttatttcggccgc
attgatttcatggaagaagggcattcaaatcaggagcaagtgtatattggcatttcttca
ctaatggacgaaagtggtgaagacttccttatttatgattggcgagcaccgatctcgagt
gtttactatgattacgagccgggccttgcccactatgcaactcctggggggatagttcaa
ggacaattgaagaaaaaatggcaatatcttgttcgagatggcgtcctgcaatcgatgttc
gatacgagtcttacgattggagatgaaattttacagcaagttttgggcaatggtactgac
aaacatatgcacagtatcgtctcgaccattcaacaggagcaaaaccaaattatccgtcat
gatcatgggagactgctcgttgttcacggggctgctggtagtggtaaaacatctgccgcg
ctccaacgaattgcttatttactttacaaatatcgtgcaagtttgacggcggatcaaatt
attttattttcaccaaatgctatgttcaacagctatgtatccaatgtgttaccggaactt
ggtgaggagaatatgcagcaagttacgtttcaggaatatttggaccatcgactgagcaac
gagcttcaagttgaaaatccgtacgatcagttagaatatgttttaactggtacgaataca
cctgcgcaccagtcaagggttacgggcatccagttcaaagcatctactgtgttttttgaa
gtgatcaaagcatataggcagtcactggaagtaaggggcatgttattcaaggatatcatt
ttcagaggacagccaattgtgacagcgcaacaactcgcggataaattttatagcagtgat
cctacaatccactttcaaaacaggcttgaaaatttgaaggattgggttttgaagcttgta
aaagacgcgggtaaagtggaacggatgaagccgtgggtacaggaagaaattgagctgttt
agcaatgaggattattataaagcgcaaacttatttagcaaaaaagcgcggttttgcacgt
gattcaattgctgattatgagatggaacctgaagcgcttgaaaggttggttgttactcaa
aaattgagtccgttgcgaaaacgtatacgggcgtttgatttcgttgatatacttggaatc
tacaagcagctttttgccgatccgttgcaaattaatgagtggattgaaggggaaacgcct
gctgaatggaacgcgatttgtcgtgcaacgttagaagtgctagatgaaggtaaattattt
tacgaagatgctacaccgtttttgcttatgaaagagttaatacaaggttttcaaacgaat
cgctcaatcaagcacatattgattgacgaggcgcaggactattcgccatttcaattcgaa
tttattaagcgtttatttccatctgctagaatgactgttctcggggactttaatcaggcg
atttttgcacatgccagtgaaatggtggatttccacgttcttagcagcttgtacggacag
gacgaaacagcagtaatcaatatgacacgtagctatcgatccacaaaaccgatcattgat
ttcacgcgaaaactcgttccgaatggtgaaaaaattattccttttgaacgagatggcgcg
ttgccggtattgacacaagtaatcgatcatgaacagcttcaccgtagtattttatccaaa
gtcgcagctttacagagtgccggttatattagtattgctatcatatgtaaatcagctgag
gaaagtaagaatgcctatgaagcgttatctagtattgatggtataaagctgttaaagaac
ggctcaccagaatatgaacaaggtgttgtcgttatcccgtcctatttggctaaagggatt
gaattcgaagcggttatcatttatgatgcatcggagaaagtatacggtgatgaaagctta
cgcagaattttctacaccgcctgcacgagagcgatgcatgaattgcaactatacagtgta
ggggagccgagcccgtttttacgaaatgctttgcaaggtagttttattcaagtttga
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