Solibacillus sp. R5-41: CSE16_18060
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Entry
CSE16_18060 CDS
T05144
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
sob
Solibacillus sp. R5-41
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sob03019
]
CSE16_18060
Messenger RNA biogenesis [BR:
sob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CSE16_18060
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
ATP41786
UniProt:
A0A2D1SXI5
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All DBs
Position
complement(3664187..3665122)
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AA seq
311 aa
AA seq
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MNEITKLQPGEQVDQFLLIKEAKKGVTTVGKPFMSLILQDRSGDIEAKLWDTNEEHENLY
RAQIIVKVGGEIHDYRGKNQLRIKQIRPVREDEGVQISDLLPTSAVPKEELYEQLTQFFF
QIQNPNISRITRHIMKKHYDSLIIFPAATKNHHDYASGLIDHVVSMLKLSSAICDLYPTL
NRDLLYAGVILHDIGKVIELSGPVGTAYTVEGNLLGHISIMVNEIGLTATELKIEGEEVM
LLQHLVLSHHGKEEWGSPKKPMIQEAEILHYIDNIDAKMNMLTRALDKAKPGEFTERLFP
LDNRSFYKPTI
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaaattacaaaactccagcctggtgaacaagttgaccaatttttattaattaaa
gaggcaaaaaaaggagtcacgacggttggaaagccatttatgtctcttattttgcaagat
cgtagtggagatattgaggccaagctttgggacacaaatgaagagcatgaaaatttatac
cgcgcacaaatcatcgtaaaagtaggcggtgaaattcatgattaccgtgggaaaaaccag
cttagaattaaacaaattcgccctgtaagagaagatgaaggtgttcaaattagtgattta
ttgccaacctcagcagttccgaaagaggaattatacgagcagctaacacaattctttttt
caaattcaaaacccaaatatttcacgtataacacgtcatattatgaaaaagcattacgac
agtttaatcattttccctgctgctacaaaaaatcatcatgattatgcatcgggtttaatt
gatcatgttgtatcaatgttgaaattaagtagtgcaatttgtgacttatatccgacattg
aaccgtgatttattatatgcgggagtcattttacatgatatcggtaaagtgattgagtta
tctggacctgttggcactgcctacacagtggaagggaacttgttggggcatatttctatt
atggtcaatgagattggactaactgcaacagaactgaaaattgaaggcgaagaagtaatg
ttacttcaacatttagtgctttctcaccatgggaaagaagaatggggtagcccgaaaaag
ccaatgattcaggaagcggaaattttacattatattgataatattgatgcgaaaatgaat
atgctgacgcgtgcgctcgataaagcgaagccaggcgaatttacagagcgcttattccca
ttagataaccgttcgttttataaaccgacgatttaa
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