KEGG   Solibacillus sp. R5-41: CSE16_19480
Entry
CSE16_19480       CDS       T05144                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
sob  Solibacillus sp. R5-41
Pathway
sob03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sob00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CSE16_19480 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sob03019]
    CSE16_19480 (groL)
   03110 Chaperones and folding catalysts [BR:sob03110]
    CSE16_19480 (groL)
   03029 Mitochondrial biogenesis [BR:sob03029]
    CSE16_19480 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sob04147]
    CSE16_19480 (groL)
Enzymes [BR:sob01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CSE16_19480 (groL)
Messenger RNA biogenesis [BR:sob03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CSE16_19480 (groL)
Chaperones and folding catalysts [BR:sob03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CSE16_19480 (groL)
Mitochondrial biogenesis [BR:sob03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CSE16_19480 (groL)
Exosome [BR:sob04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CSE16_19480 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   CSE16_19480 (groL)
  Exosomal proteins of breast cancer cells
   CSE16_19480 (groL)
  Exosomal proteins of colorectal cancer cells
   CSE16_19480 (groL)
  Exosomal proteins of bladder cancer cells
   CSE16_19480 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: ATP42025
UniProt: A0A2D1SY54
LinkDB
Position
complement(3963555..3965192)
AA seq 545 aa
MAKDIKFSEDARSLMAAGVDKLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVSIAKEIE
LENPFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPVGIRKGMD
KAVAAALTELQAISRPVENKESIAQVASISSGDEEIGGYIADAMERVGNDGVITIEESKG
FTTELDVVEGMQFDRGYASHYMVTDTDKMEAVLDNPFVLITDKKIASIQEILPVLEQVVQ
QGRPILIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGQVIT
QDLGLDLKTADLTSLGRAVKVIVSKDNTTIVEGAGNTDAVAARVNQIRMQLAETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNV
YGAVVNVLEEVEGDVATGVKIILRALEEPVRQIAENAGLEGSIIVDRLKREEVGIGFNAA
TGEWVNMIEAGVVDPAKVTRSALQNAASVASLFLTTEAVVADIPEAGGGMGMPDMGGMGG
MGGMM
NT seq 1638 nt   +upstreamnt  +downstreamnt
atggcaaaagacattaaattttcagaagacgcacgctcattaatggcggctggtgttgat
aaattagcaaatgctgtaaaggtaacacttggaccaaaaggacgtaacgttgtattagaa
aaaaaattcggttcaccactaattacaaatgacggtgtttcgatcgcaaaagaaatcgag
ttagaaaacccatttgaaaacatgggtgcaaaattagtagcagaagtggcttctaaaaca
aatgaaattgctggtgacggtacaactacagcaacggttcttgcacaagcgatgatccgc
gaaggtttaaaaaacgtaacagctggcgcaaaccctgttggcatccgtaaagggatggat
aaagcggttgcagctgcattaacagagcttcaagccatttcacgcccagtggaaaacaaa
gagtcgatcgcacaagtagcatctatctcttcaggtgacgaggaaatcggtgggtacatt
gcagatgctatggaacgagttggcaatgatggtgttattacgattgaagaatcaaaaggc
ttcacaacagagcttgatgttgtagaaggtatgcaatttgaccgtggttatgcttcacac
tacatggtgacagatacagacaaaatggaagcggtactagataacccattcgttttaatt
acagataaaaaaatcgcaagcattcaagagattttaccagtgcttgagcaagttgtacaa
caaggtcgtccaattttaattattgcggaggacgttgaaggggaagcattagcaactctt
gtagtgaataaacttcgcggtacattcaatgccgtagcagtaaaagcaccaggctttggt
gaccgtcgtaaagcaatgctagaagatattgcgattcttacaggtggtcaagtgattaca
caagatcttggcttagatttaaaaacagcagacttaacttcattaggtcgcgcggtaaaa
gtaatcgtttcaaaagataatacaacgatcgttgaaggcgctggtaacacagatgcagta
gcagcacgcgtgaatcaaattcgtatgcagcttgctgaaacgacttcagagttcgataaa
gaaaaattacaagagcgcttagcaaaattagcaggcggtgttgccgttattaaagtaggg
gcagcaacagaaacagaattaaaagaacgtaaattacgcatcgaggacgcactgaactca
acacgtgcggcagtagaagaaggtatcgtatcaggtggtggtacagcccttcttaatgta
tatggtgcagtagtgaacgtgcttgaagaagtagaaggtgatgtagctacgggtgtgaaa
atcattttacgtgcattagaagaaccagtacgtcaaattgctgagaatgcgggtcttgaa
ggttcaatcatcgtagaccgcctaaagcgagaagaagtaggaattggcttcaatgcagca
acaggtgaatgggtaaacatgattgaagcaggcgtagtagacccagcaaaagtaacgcgt
tcagctttacaaaatgctgcatcagtcgcttcactattccttacaacggaagcagtagta
gcagacatcccagaagcaggcggcggtatgggtatgcctgatatgggtggcatgggtggc
atgggcggcatgatgtaa

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