Solibacillus sp. R5-41: CSE16_19480
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Entry
CSE16_19480 CDS
T05144
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSE16_19480 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sob03019
]
CSE16_19480 (groL)
03110 Chaperones and folding catalysts [BR:
sob03110
]
CSE16_19480 (groL)
03029 Mitochondrial biogenesis [BR:
sob03029
]
CSE16_19480 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sob04147
]
CSE16_19480 (groL)
Enzymes [BR:
sob01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CSE16_19480 (groL)
Messenger RNA biogenesis [BR:
sob03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CSE16_19480 (groL)
Chaperones and folding catalysts [BR:
sob03110
]
Heat shock proteins
HSP60 / Chaperonin
CSE16_19480 (groL)
Mitochondrial biogenesis [BR:
sob03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CSE16_19480 (groL)
Exosome [BR:
sob04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CSE16_19480 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CSE16_19480 (groL)
Exosomal proteins of breast cancer cells
CSE16_19480 (groL)
Exosomal proteins of colorectal cancer cells
CSE16_19480 (groL)
Exosomal proteins of bladder cancer cells
CSE16_19480 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ATP42025
UniProt:
A0A2D1SY54
LinkDB
All DBs
Position
complement(3963555..3965192)
Genome browser
AA seq
545 aa
AA seq
DB search
MAKDIKFSEDARSLMAAGVDKLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVSIAKEIE
LENPFENMGAKLVAEVASKTNEIAGDGTTTATVLAQAMIREGLKNVTAGANPVGIRKGMD
KAVAAALTELQAISRPVENKESIAQVASISSGDEEIGGYIADAMERVGNDGVITIEESKG
FTTELDVVEGMQFDRGYASHYMVTDTDKMEAVLDNPFVLITDKKIASIQEILPVLEQVVQ
QGRPILIIAEDVEGEALATLVVNKLRGTFNAVAVKAPGFGDRRKAMLEDIAILTGGQVIT
QDLGLDLKTADLTSLGRAVKVIVSKDNTTIVEGAGNTDAVAARVNQIRMQLAETTSEFDK
EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALLNV
YGAVVNVLEEVEGDVATGVKIILRALEEPVRQIAENAGLEGSIIVDRLKREEVGIGFNAA
TGEWVNMIEAGVVDPAKVTRSALQNAASVASLFLTTEAVVADIPEAGGGMGMPDMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacattaaattttcagaagacgcacgctcattaatggcggctggtgttgat
aaattagcaaatgctgtaaaggtaacacttggaccaaaaggacgtaacgttgtattagaa
aaaaaattcggttcaccactaattacaaatgacggtgtttcgatcgcaaaagaaatcgag
ttagaaaacccatttgaaaacatgggtgcaaaattagtagcagaagtggcttctaaaaca
aatgaaattgctggtgacggtacaactacagcaacggttcttgcacaagcgatgatccgc
gaaggtttaaaaaacgtaacagctggcgcaaaccctgttggcatccgtaaagggatggat
aaagcggttgcagctgcattaacagagcttcaagccatttcacgcccagtggaaaacaaa
gagtcgatcgcacaagtagcatctatctcttcaggtgacgaggaaatcggtgggtacatt
gcagatgctatggaacgagttggcaatgatggtgttattacgattgaagaatcaaaaggc
ttcacaacagagcttgatgttgtagaaggtatgcaatttgaccgtggttatgcttcacac
tacatggtgacagatacagacaaaatggaagcggtactagataacccattcgttttaatt
acagataaaaaaatcgcaagcattcaagagattttaccagtgcttgagcaagttgtacaa
caaggtcgtccaattttaattattgcggaggacgttgaaggggaagcattagcaactctt
gtagtgaataaacttcgcggtacattcaatgccgtagcagtaaaagcaccaggctttggt
gaccgtcgtaaagcaatgctagaagatattgcgattcttacaggtggtcaagtgattaca
caagatcttggcttagatttaaaaacagcagacttaacttcattaggtcgcgcggtaaaa
gtaatcgtttcaaaagataatacaacgatcgttgaaggcgctggtaacacagatgcagta
gcagcacgcgtgaatcaaattcgtatgcagcttgctgaaacgacttcagagttcgataaa
gaaaaattacaagagcgcttagcaaaattagcaggcggtgttgccgttattaaagtaggg
gcagcaacagaaacagaattaaaagaacgtaaattacgcatcgaggacgcactgaactca
acacgtgcggcagtagaagaaggtatcgtatcaggtggtggtacagcccttcttaatgta
tatggtgcagtagtgaacgtgcttgaagaagtagaaggtgatgtagctacgggtgtgaaa
atcattttacgtgcattagaagaaccagtacgtcaaattgctgagaatgcgggtcttgaa
ggttcaatcatcgtagaccgcctaaagcgagaagaagtaggaattggcttcaatgcagca
acaggtgaatgggtaaacatgattgaagcaggcgtagtagacccagcaaaagtaacgcgt
tcagctttacaaaatgctgcatcagtcgcttcactattccttacaacggaagcagtagta
gcagacatcccagaagcaggcggcggtatgggtatgcctgatatgggtggcatgggtggc
atgggcggcatgatgtaa
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