Solibacillus sp. R5-41: CSE16_20405
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Entry
CSE16_20405 CDS
T05144
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sob
Solibacillus sp. R5-41
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sob03016
]
CSE16_20405
Enzymes [BR:
sob01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CSE16_20405
Transfer RNA biogenesis [BR:
sob03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CSE16_20405
Prokaryotic type
CSE16_20405
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ATP42176
UniProt:
A0A2D1SYP0
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Position
complement(4142544..4143293)
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AA seq
249 aa
AA seq
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MTRIKAIISYDGTQFAGYQVQPGKRTVQLEIEKVLSKMHKGATVKIIASGRTDARVHATG
QTIHFDTSLMIPSDNYMKALNVQLPRDIRVLQLEQVADDFHARYDAVGKRYRYIWDCGTV
QSPFRRHYAVETNGIKPNVTAMIDAARAIVGQHDFSCFCAANTSVIDKVRTVSALDFEWH
QEELHMTISGDGFLYNMVRIIAGTLWEAGIEKRDFASVVQTIASQDRNQSGKTAPAHGLY
LEEVFYDKE
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacgagaataaaagcgattattagttatgacggtacgcaatttgctggctatcaggta
cagcctgggaagcgtactgtacagcttgaaattgaaaaagtactttccaagatgcataag
ggcgcaactgtaaaaatcatagcaagtggacgaacggatgcacgtgtccatgcaacaggg
cagacgattcattttgatacgtcattaatgattccctctgataactacatgaaagcgtta
aatgtgcagctaccgcgtgatattcgtgtgctacagctcgaacaagtggccgatgatttt
catgcacgttatgatgcggtcggaaagcgttaccggtatatttgggattgtggtacagtt
caaagtccattccgtcgtcactatgcagtggagacaaatggtattaaaccaaacgttaca
gcaatgatcgatgctgcaagggcgattgtcggtcaacatgactttagctgcttttgcgcg
gctaatacgagtgtaatcgataaagtgcgtacagtaagtgctctcgattttgaatggcat
caggaagagctccatatgaccatttcaggagacggatttctatataatatggtacgcatt
attgcaggcaccttgtgggaagccggcattgaaaaacgggattttgcgtcggttgtacaa
acgattgcctcacaagacaggaaccaatctggtaaaactgcaccagcacatggtttgtat
ttagaagaagtcttctatgataaagaataa
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