Solibacillus sp. R5-41: CSE16_20430
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Entry
CSE16_20430 CDS
T05144
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sob
Solibacillus sp. R5-41
Pathway
sob03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sob00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CSE16_20430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sob03021
]
CSE16_20430
03400 DNA repair and recombination proteins [BR:
sob03400
]
CSE16_20430
Enzymes [BR:
sob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CSE16_20430
Transcription machinery [BR:
sob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CSE16_20430
DNA repair and recombination proteins [BR:
sob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CSE16_20430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SpoIVA_ATPase
Dockerin_1
HHH_5
PASTA
DUF961
Motif
Other DBs
NCBI-ProteinID:
ATP42181
UniProt:
A0A2D1SYJ1
LinkDB
All DBs
Position
complement(4146698..4147642)
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEISEAAKYGKFVVEPLERGYGNTLGNSLRRILLSSLPGAAVTSIQIDG
VLHEFSTVEGVVEDVASIILNVKKLALKIYSDEEKVIEIDVKGDGTVTAADITHDSDVEI
LNPDLYIATIAKNGHLRMRMYAQRGRGYTPADQNKREDLPIGVIPIDSIYTPVSRVNFQV
ENTRVGQNSDYDKLSLDVWTDGSIGPKEAISLGAKILTEHLNIFVGMTNEAQTAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVLELANKSEDDMMKVRNLGRKSLEEVK
AKLEELGLGLRNED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaattgaaaaaccaaagattgaaacagtggagatcagcgaagctgccaaatat
ggcaagtttgttgtagaaccgctagaacgcggatatggaaacactttgggtaattcttta
cgtcgtatccttctgtcttcattacctggagctgctgtaacgtcaattcaaattgacggc
gtactacacgaattctctactgtagaaggcgttgtagaagatgttgcttcaattatctta
aacgtgaaaaagctagctttaaaaatctactctgacgaagaaaaagtcattgagatagat
gtgaaaggtgacggaacggttactgctgctgacattacacatgacagtgatgtagaaatt
ttaaatcctgatctatatattgcaacaatcgctaaaaacggtcacttacgtatgcgtatg
tacgcacaacgaggccgtggttacactcctgctgatcaaaacaaacgtgaggatcttcct
atcggcgtgatcccgatcgactctatttacactccagtttcacgcgtcaacttccaagtt
gaaaacactcgtgttggacaaaattctgactacgataagttatcacttgatgtgtggact
gatggtagcatcggtccaaaagaagcgatttcacttggagctaaaattttaacagagcat
ttaaacatcttcgtgggcatgacgaacgaagcacaaactgctgaaatcatggtcgaaaaa
gaagaagatcaaaaagaaaaagtattagagatgactatcgaagagcttgatctttctgtt
cgttcttataactgtttaaaacgcgctggtatcaatacggtactagaattagcgaataaa
tcagaagatgatatgatgaaagtacgtaacttaggtcgtaagtctttagaagaagtaaaa
gcgaagttagaagagcttggtttaggattacgtaatgaagactaa
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