Solenopsis invicta (red fire ant): 105192974
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Entry
105192974 CDS
T03916
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit
KO
K07466
replication factor A1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03030
DNA replication
soc03420
Nucleotide excision repair
soc03430
Mismatch repair
soc03440
Homologous recombination
soc03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105192974
03420 Nucleotide excision repair
105192974
03430 Mismatch repair
105192974
03440 Homologous recombination
105192974
03460 Fanconi anemia pathway
105192974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
soc03000
]
105192974
03032 DNA replication proteins [BR:
soc03032
]
105192974
03400 DNA repair and recombination proteins [BR:
soc03400
]
105192974
Transcription factors [BR:
soc03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105192974
DNA replication proteins [BR:
soc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105192974
DNA repair and recombination proteins [BR:
soc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105192974
MMR (mismatch excision repair)
105192974
DSBR (double strand breaks repair)
HR (homologous recombination)
105192974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CDC24_OB3
IBR
zf-AN1
Motif
Other DBs
NCBI-GeneID:
105192974
NCBI-ProteinID:
XP_011155579
LinkDB
All DBs
Position
3:200804..205312
Genome browser
AA seq
600 aa
AA seq
DB search
MNEYNLTTGALQKIMKGIDIDKPILQMLGYKKLPKNKDGATDRYRLLVSDGEKLNSFTML
ATQLNNLIEDDILNEFSICKITNYHLSSVNNSGKEKRVMLILDIEVVVSGEKVGGRIGNP
TNIELKSEPDTPSTSTTTTVRHQNGSTRTGNSNQASSDIHTTPIAALSPYQNRWVIKARV
INKSPIKTWSNSRGEGKLFSMDLIDESGEIRCTAFRDVVDKFYDLIVTGNIYYISRCVLK
AANKQFNTMKNDYEMTMNSDTEIVPCHDSSNDIPTLQFNFSPISQVESKEKNDLLDVLGV
VTTVGDVQHITARTTGRELIKRDISIVDDSGTMVTVTLWGTQAEEFGASNNTIIAIKGAR
VGEFNGGKNLSLVMSSIIEKDPDIPEAHRLRGWYTAVGHSETAKSLSRVGGSTDFNGPLY
TFQEATDARLGEKMNLPDSFTAVATIKQIRTENSLYRACPVESCKKKLIDQDNGIFRCEK
CNKEYPNFTYRLLASMELADATGSRWITAFNEEAEKILGMSAQELGELKENDKDAYLQKF
GEATFKTFMFNLKARSEVFQDEMRIKHVCTSAGPINYKTYLPHLIDKVSKLLNIEKLDSN
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagtacaatttaacaacgggagcgttgcagaaaattatgaagggcatagacatc
gataaacccatacttcagatgctgggatataaaaaattgccaaaaaataaagatggtgca
acggatcgatatagactgttggtatcagatggagaaaaattaaactcgttcactatgttg
gctactcaattgaacaatctgatcgaggatgatattttgaatgaattctcaatctgcaaa
ataaccaattatcacctgagttcggtgaacaacagcggcaaagaaaaacgtgtgatgctg
atattagatatagaagttgttgtttccggagagaaagttgggggcaggataggcaatcca
actaatatagagctcaaatcagagccagatacaccatctacgtctacaaccacaactgtg
cgtcatcaaaatggttcaaccagaacaggtaattcaaatcaagcttcttctgatatacac
accacgccaattgcagcactgagtccttatcaaaataggtgggtgattaaggcacgagta
atcaacaaatctccaattaaaacatggagtaattctcgtggagaaggcaaactcttctct
atggatttgatcgatgaaagcggcgaaatcagatgcacagcatttagagatgtggttgac
aaattttatgacttgatagtgactggaaatatatactacatctcgcgatgtgtattaaaa
gcagccaataaacaatttaatactatgaaaaatgattacgagatgacaatgaactctgat
acagagatcgtgccttgtcatgacagcagcaatgacattccaacactacaatttaatttc
tctcctataagtcaagtcgaaagcaaagaaaaaaatgatttactagatgtcttgggcgtc
gtcacaactgttggtgatgtacaacatattacggcgcgcactacaggccgagaacttata
aagagggacatcagtatagttgatgacagtggtacgatggtaactgttacactctgggga
acacaggccgaggagtttggtgcttccaataataccattattgctattaagggagcgcgc
gtaggcgaatttaatggtgggaaaaacttgtcattagtaatgtcctctataattgaaaag
gatcctgatattcctgaagcacatagattgcgcggatggtacactgcagttggccattca
gagactgctaaatcattatctagagtaggtggaagtactgacttcaatggaccattgtac
actttccaggaagcaaccgatgctcgattgggagagaaaatgaatctcccagattcattt
acagcagtggcgaccattaagcaaattagaactgaaaattctctctacagggcgtgtcct
gtagaaagttgcaagaagaagttgatcgatcaagataatggtatcttcagatgcgaaaag
tgtaacaaggagtatccaaattttacatatcgcttactggcaagtatggaattggcggat
gcaacgggtagtcgctggataactgcatttaatgaggaagcagaaaagatacttgggatg
tctgctcaagagttgggtgaattgaaagagaatgataaagatgcctatttgcagaaattc
ggtgaggcaactttcaaaacattcatgttcaacctgaaggcaagatcagaagttttccag
gatgaaatgaggataaaacatgtctgtacgtcagccgggccgatcaattataagacttat
cttccacatctgatagataaagtctctaaactattaaacattgagaaattggattctaat
taa
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