Solenopsis invicta (red fire ant): 105193254
Help
Entry
105193254 CDS
T03916
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105193254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105193254
03012 Translation factors [BR:
soc03012
]
105193254
Enzymes [BR:
soc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105193254
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
105193254
Translation factors [BR:
soc03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105193254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
ResIII
AAA_22
ATPase
PhoH
NPHP3_N
AAA_14
AAA_19
NACHT
NB-ARC
AAA_16
ABC_tran
ATPase_2
Orbi_VP5
Pyr_redox_3
TsaE
Motif
Other DBs
NCBI-GeneID:
105193254
NCBI-ProteinID:
XP_025987065
LinkDB
All DBs
Position
1:complement(23044171..23050290)
Genome browser
AA seq
958 aa
AA seq
DB search
MSHRRGFRGLSNSFMRRDRDGQSQSTSGRGRPPGLRGKEIGLYYRNKNIEREKRNSSARL
KLSPEIEQRIKTILYNSKSYYNLTSYDDFKSEDSRYHQIHDVQFKRKFLTIINGDMQQNL
ARAMTAKSKLQRNSDIDRILQKEYREKQSEDAYQSMLKFRSKLPAYKKKSEILQLIEDNQ
VVVISGETGCGKTTQVAQFILDDELEAGNGSVTRIICTQPRRISAISVAERVAMERTEKL
GRSVGYQIRLEKIPSRDQGSILFCTTGVLLQIMKHDPALKSFSHVILDEIHERTTESDFV
ITLLKQVIPKRVDLKVLLMSATLNAERFSKYYDNCPMIHIPGFTYPVQEFYLEDVLSFVD
YRFPDPRPEPTGYRKHLKSYKEQKHKTEEFLDILQPYIRQLTLENKYDARVINQLRNPVS
ETLSLDLIEELVRYICNTKGPGAILIFLPGMLDISNLNKMMLDSERYPSHKYIIYALHSR
LPSVDQKLIFKEPPHGVRKIIIATSIAETSITIEDVVYVIDCGKTKFGKFDINKNIQTLE
PEWVSLANAKQRRGRAGRVQSGECYHLYTKAREMTFDQYPLPEMLRTRLEEVILQIKILQ
LGKVEEFLVTVMDPPDPKAIHLSLELLQTLNALDTHENLTPLGYHLAHLPLDPRTGKMIL
WGALFSCVEPIFAIAASLTFKDAFYCPLGQEEKANRKKLELSMQQCSDHIALAEALRRYE
VARHRGNARQFCREYFLSYNTLKLLSEMKNQFAQYLYDMKFLDSDNPSHVNSNRNSDNIA
LIKAIVCAGLYPNIAVIRRVTKNGIISWTPEDGSVRIHPSSVNNKAFSFPSRYLTYFTKQ
RSTAIFLHDTTCISVPILLFAGPNISIRREKGQYVIGNFSFSENIICEQETAQMIQELQQ
ALNSLLEYKITNPATVSWLTFEGDLLNGIIELISQTDEDLGFNRDAYLYEHFSGNDVH
NT seq
2877 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatcgacgcggtttcagaggcttgtcgaactccttcatgcgacgtgacagagat
ggacaatcacagtctacatctggacgtggaagacctccaggactgaggggaaaagaaata
ggattgtattatagaaacaaaaatatagaaagagaaaaaagaaatagttcagcaaggctc
aaattgtcacctgaaatagagcaaagaattaagaccatattatataattcaaagagctat
tacaatttaacttcttacgatgatttcaagtctgaagatagcagatatcatcagattcat
gatgttcaatttaaaagaaaatttttaactattataaatggtgatatgcagcagaatctt
gctagggctatgactgcaaagtcaaagttgcaaagaaatagtgacattgatagaatatta
caaaaggaatacagagaaaagcagagtgaggatgcttatcaaagtatgttgaaatttcga
tcaaagttaccagcatataaaaaaaaatcagaaatactacaactgatagaagataatcaa
gttgttgttattagtggagaaaccgggtgtggcaaaaccactcaagttgcacagtttata
ttggatgatgaattagaagctggaaatggtagcgttactcgaataatttgcacacagcct
agaaggatatcggctatttccgttgctgaacgtgtagctatggaaagaacagaaaaactt
ggaagatctgtcggctatcaaatacgactcgaaaagattccatcgcgagatcaaggaagt
atattgttttgtactactggtgtattactacaaattatgaagcatgatccagcgttaaaa
agtttctctcatgtgatattggatgaaattcatgaacgtaccacagaaagtgattttgtc
attacattattaaagcaagttattccaaaaagagtagatttaaaagttctcttgatgagt
gcaacattgaatgctgaaaggttttccaagtattatgacaattgcccgatgatacatata
ccaggattcacctatccagtacaggaattttatttagaagatgttttgtcatttgtagat
tatagatttcctgacccacggccagaacctacaggttacaggaaacacttaaaaagctac
aaagagcaaaaacacaagacagaagaatttttagatatattacaaccttatattagacaa
cttacacttgagaacaaatacgatgcacgtgttattaatcagttacggaatccagttagt
gaaactctttcattggatcttatagaagaattagttagatatatctgtaatacaaaaggt
cctggagctattcttatttttttacctggtatgctagatatatcgaatttaaataaaatg
atgttagattctgaacgttatccaagtcataaatacatcatctatgctcttcattcacgt
ttgccatcagttgatcagaaacttatatttaaagaaccacctcatggcgttcgtaagatt
atcattgcgacttcaattgctgaaacatcaataacaatagaagatgttgtatatgtaata
gattgtggaaaaacaaaatttggaaaatttgacataaataagaatattcagactttagag
cctgaatgggtatccttagctaatgccaagcaaagacgtggtagggctggcagggttcaa
agtggagaatgttatcatctgtatacaaaagcacgagaaatgacatttgatcaataccca
ttgccagagatgttaagaacgcgcttagaagaggtaattttgcaaataaaaattctgcaa
ttgggaaaagttgaagaattcctcgttaccgtcatggatccgccagatccaaaagcgatt
catctgtcccttgaattacttcagacactcaatgccctcgatacacacgagaatttgact
cctttgggttatcacttggcgcacttgccacttgatcctagaacaggaaaaatgattctg
tggggcgcattattctcttgtgtcgagccaatatttgctattgctgctagtctcacattt
aaagatgctttctattgtccattaggacaagaggaaaaggctaatagaaagaaattagaa
ctcagcatgcaacagtgtagcgatcatattgctctcgcggaagctttaagaagatatgaa
gttgcacgtcacagaggaaatgctcgccagttttgtcgggagtatttcctttcttataac
acattgaagctcctttctgaaatgaaaaatcaatttgcacaatatttatacgacatgaaa
tttctagacagcgataacccaagtcatgtaaattctaacagaaattcggataacatagct
ttgataaaagctattgtctgtgcaggattatatcctaacatcgctgttataaggcgagtt
actaaaaatggaataattagttggactccggaagacggtagtgtacgtatacatccgtcg
agcgtaaacaacaaagctttcagctttcctagtcggtacttgacatatttcacaaaacaa
cgctccaccgccatatttttacatgacactacatgtataagtgtacctatcttactgttc
gccggaccaaatatatcgataagacgagaaaaaggacaatatgtaattggtaatttcagt
ttttcggaaaacatcatttgtgaacaagaaactgcgcaaatgatacaggaacttcaacaa
gctctgaatagtttattggaatataaaattacgaatccagcaacggtatcttggctcact
tttgaaggagacttattaaatggaatcattgaactgatctctcaaacagatgaagatttg
ggttttaatagagatgcatatctttatgaacatttcagtggtaatgatgttcattga
DBGET
integrated database retrieval system
