Solenopsis invicta (red fire ant): 105193337
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Entry
105193337 CDS
T03916
Name
(RefSeq) laminin subunit gamma-1 isoform X1
KO
K05635
laminin, gamma 1
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
105193337
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
T3SchapCesA
GDH_HM2
Motif
Other DBs
NCBI-GeneID:
105193337
NCBI-ProteinID:
XP_011156046
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All DBs
Position
5:complement(15013765..15029006)
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AA seq
1622 aa
AA seq
DB search
MKGSAIWGLLLLVGSCIVLADPEAEPSEELFNRLQLPKHRKEDKCYDENGRPQRCIPPFE
NAAFNVPMEATNTCGEDRPIEFCKQTGVQKKSCEICRRGDHSAIFLTDHDNNDNATWWQS
DTMYEGIGYPNQVNLTLPLGKTFDITYIRVLFESPRPESWAIYKRKNEKSSWEPYQFYSA
TCRDTYDLPESKETVRGDDTRVLCTSEFSDISPLTKGTVAFSTLEGRPSAYYFETNPELQ
EWVQARDIRITLDRSNTFGDEVFGDAQVLKSYYYAIADVAVGARCACNGHAGECVNSTSV
DGRTRRVCRCEHNTAGPDCNECLPFYNDAPWGRATTTDAHECKPCNCNGYSDRCYFDKEL
YKTSGHGGHCLDCRANRDGANCERCRENYYQRPEDNYCIACNCNEIGSRSLQCNSEGKCQ
CKPGVTGDKCDRCAANFYNFGSQGCTSCECNLAGSADNVPNCDPITGVCACKENVEGKRC
RECRPGFFNLAVDNEFGCTPCFCYGHSSVCRPTNGYSKLFIESMFVRGNERWSASVAGNP
ITLHYDALTQTISVTALDRDNVYFLAPNKFLGDQRASYNQDITFILRIGETGPAPTARDV
ILEGGNGEQITQPIFGQNNRLPTVTPQEYRFKLHEHVKYGWQPRLSSRAFMSILSNLTAI
KIRGTYTHQGRGFLDDVKLETAHRGAAGEPADWVEHCQCPHGYVGQFCESCAPGFHHDPP
NGGPFALCVPCNCNGHADICEAETGQCICQHNTAGSNCELCSRGYYGYPLKGTPDDCKPC
PCPDNGPCILLGNNPDPICSECPIGRTGPRCETCSDGYYGNPERGLACRSCDCNNNIDLN
AVRNCNHETGECLKCVNNTAGFHCEECLAGYYGDALSDRKEDGCKLCQCYPPGTLELDDG
RVAPCDQLTGHCACKPHVIGRNCDKCEEGYYHIMSGEGCTPCNCDLEGSYNRTCDPITGQ
CQCRLGVTGQHCDACEPYQYGFSREGCKPCDCDSIGSQDLQCDANGQCLCLTNVEGRRCD
RCKENKHNRQHGCIDCPDCYNLVQSAVNDHRRRLAELEDTLYKINSSPTVIKDSDFEKEL
KNVQDRVKALLSVAKQGSGSENKTLVEQLDELREQLNTIDKIYQTVDVTTNDVDDITEEG
LTSITEAENVLDKIHEQLTEAEDYLGTEGASALASAKLRAEQVGQQNQQMTSIAQEARLL
AEVNTNEAKKLHMLAEQARNTTLEAYNLAKQTISKYSNITDEIRDLETKLAQLEDRMDEV
RNLTAIAATKSSAVSQEALDLLILDLTLPPVNIEQLRQQIESVSSASLQIKEQAQLLLEK
NENFIKEMAEKVKKSEELLDRAQDQEAATAELLAELDEADETANKAVKRGDQTLKEAQET
LKKLGEFDAEVQRERVKAQSALMDIEHIEDLIRYVNEQARETEKKLNGSEENAKSAREIV
QNAQNYADKASANANNIRTEANKTKIEALRLGNEVEKLHLRVDTTDSMIKQYEIQMSKDT
NITAEANYKVGQAKTNVTLASQQVDKALSDVAAIIRELENLPEIDDADLNRLEERLIAAE
KEIKAVNLDQRIRALTEAKILQTQWVKNYEDEVNRLRIEVENIDDIRKALPTDCYQRVRL
EP
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaaagggagcgcgatatggggtctgctgttgctcgtgggaagctgcatcgtcctggcc
gatccagaggccgagccttcggaggagctgttcaatcggctgcagcttccgaagcaccgc
aaagaggacaagtgttatgatgagaatggcaggccgcagagatgtataccgccgttcgaa
aacgcggcttttaacgtgccgatggaggcgacgaacacgtgcggcgaggaccgtccgatc
gaattctgcaagcagacaggcgtgcaaaagaagtcgtgcgagatttgccgacgcggcgat
cactcggccatcttcctcaccgaccacgataataacgacaatgctacctggtggcaatca
gacaccatgtacgaggggatcgggtatcccaatcaggtcaatctcaccctccctctagga
aaaacatttgacataacatacatcagagtactgtttgaatcaccccggccggaaagctgg
gctatctacaagcggaagaacgagaagtcttcgtgggagccttatcagttttattcagcg
acgtgccgggatacgtacgatctgcccgaatccaaagagaccgttcgcggtgacgacacc
cgcgtgctatgtacctcggaattctctgatatctccccgctcactaaaggcaccgtcgct
ttctcgaccttggagggccgaccttctgcttattattttgagaccaaccccgaacttcag
gaatgggtacaagcaagggatataaggattactttggacaggtcgaacacgttcggtgac
gaagtttttggcgacgctcaagtgttgaaatcttactattatgcgatagctgatgtagca
gtcggtgcgagatgcgcctgcaatggacacgccggagaatgtgtaaacagtactagtgtc
gatggcagaactcgcagagtctgccgatgtgagcacaataccgctggtccagactgcaac
gagtgtttacctttttacaatgacgctccttggggccgtgccacgactacagatgcgcac
gaatgcaaaccttgcaattgtaacggatactcggacaggtgctacttcgataaggaattg
tataagacgtcaggtcatggaggtcattgcttagattgtcgagcaaatcgcgatggcgct
aattgcgagcggtgtcgcgaaaactattatcagcgacccgaggataactattgcatcgca
tgcaactgcaatgagattggttcgagaagcttgcagtgcaatagcgagggcaaatgccaa
tgtaaacctggtgtaacgggggataaatgcgatcgttgtgcagccaatttttacaatttc
ggctcacagggctgtacttcctgcgagtgcaacttggcaggatcagcggataatgttcct
aattgcgaccctatcacaggagtttgtgcctgcaaagaaaacgtcgagggaaaacgctgt
agagaatgtcgtccaggtttctttaatctggcagtggataatgaattcggctgtactcct
tgtttctgttatggccattcctcggtttgtcgaccaacgaacggttactcgaagctgttc
attgaaagtatgttcgtgcgaggaaacgaacgctggtccgcatctgtggctggtaatccg
attacattgcattacgatgcactgacgcagacgatctcggttactgcacttgaccgtgac
aacgtgtactttctcgcgcccaacaaatttctgggagaccagcgagcgtcatacaatcaa
gacataacgttcatactgaggataggggaaactggtccagctcctacggcacgcgatgta
atcttagagggtggaaatggcgagcagatcactcagccgatcttcgggcagaacaaccgt
ttaccgactgttacacctcaagaatatcggtttaaattgcacgaacacgtcaagtacggc
tggcaaccgcgattgtcttctcgtgccttcatgtcgattctgtcaaacttgactgccata
aagattcgcggaacttacactcatcaaggccgaggatttttggacgatgtgaaattagaa
acggcacatcgtggcgcagctggcgaaccagccgattgggtggaacactgccagtgtcct
catggttacgtcggtcaattttgtgagtcgtgtgcacccgggttccatcacgatccgccc
aatggcggtccctttgccctttgtgttccttgtaactgcaatggacacgctgatatttgc
gaggccgagacaggacagtgtatctgtcagcataatacagcaggaagcaattgcgagtta
tgtagtagaggatattatggttatccattaaaaggaaccccagacgattgcaaaccgtgc
ccttgtcccgataatgggccttgcattcttttgggcaacaatccggatcccatttgctcc
gaatgtcctattggcagaactggacctagatgcgaaacatgttccgatggttactatggg
aatcctgagagaggtcttgcttgtcgatcttgcgactgcaacaacaatatcgatttaaat
gcagttagaaattgtaatcacgaaacgggagaatgtctcaaatgcgtcaataatactgca
ggttttcattgtgaggaatgtctagccggatattacggagatgcactgtcagatcgcaag
gaagatggatgtaagttgtgccagtgttatccaccgggtactttggaacttgatgatgga
agagttgcgccttgcgatcaattaacaggacattgcgcttgcaagccgcatgttataggt
cgcaattgcgacaagtgcgaggaaggctactaccatattatgagtggggagggttgtaca
ccttgtaactgcgatcttgaaggttcttataatcgcacttgtgatccgataacaggacaa
tgtcagtgccgacttggagtgacgggtcaacattgcgatgcgtgtgaaccctatcagtac
ggattcagccgtgagggttgcaagccttgcgattgcgacagtattggctcccaggatttg
caatgcgatgcaaatgggcaatgtctttgcttgacgaacgttgaaggcagacgttgtgac
cgttgcaaagagaacaagcacaaccgtcaacatggctgcattgattgtcctgattgttac
aatcttgtacaatcagcagtcaacgatcatcgacgacgtttggctgaacttgaagatacc
ctctataagatcaacagcagtcctactgtcatcaaggattcagactttgagaaagagctc
aaaaacgttcaggatagagtaaaagcattattgtctgtagccaaacaaggatccggcagt
gagaataaaacgttagtagaacagttagatgagttgcgtgagcaattaaatacaattgac
aagatctatcaaaccgtggacgtaacaacaaatgatgtggatgatataactgaggaaggt
ttgacgagtatcaccgaggcagaaaatgttttggacaaaatccacgaacagctaacggaa
gcagaggattatctgggcacggaaggagcgagtgctttagcttcggcaaaattgcgcgct
gagcaagtcggccaacagaatcagcagatgacatcgatcgcacaagaggcgcgtttactc
gccgaagtaaatacaaatgaagccaaaaaacttcatatgctggcggaacaggcgcgaaac
acgacattggaagcttacaatctcgcgaaacaaacaatatcgaaatattccaatataacg
gatgaaataagagatctggagaccaagctggcgcaactggaagatcgtatggatgaagtg
aggaatctcactgccatcgcagccactaaatcctcagctgtttctcaggaagcgttagat
ttgctaatccttgatttaacgcttcctccagtcaatatcgagcagttgcgacagcaaata
gaaagcgttagcagtgcgagtttacagataaaggaacaggcgcaactcttgttggagaag
aatgagaatttcatcaaagagatggctgaaaaagttaaaaagagcgaagaactattagac
agagctcaagatcaagaggctgcaacggccgaactattagctgaattggatgaagctgac
gagacagcaaataaggctgttaaacgtggtgatcagacgttaaaagaagctcaagagact
ttaaagaaattgggagaatttgatgctgaggtgcaacgtgaacgtgtaaaggcgcagagt
gctttgatggacattgaacatattgaagacttgattcgctatgttaacgaacaagctaga
gaaacagaaaaaaaactaaatggttcggaagaaaatgctaaaagtgcacgtgaaattgtg
caaaacgctcagaattacgcggataaagctagcgctaacgcaaacaacatcagaacagaa
gctaataaaactaaaatcgaagctctacgactcggaaatgaagttgaaaagttacacctc
cgagtcgacactacggattcgatgatcaaacaatatgagattcaaatgagcaaggacaca
aatatcaccgccgaggcaaattataaagttggtcaagcaaagactaatgtaactctggca
tcacagcaagtcgataaggccttatccgatgttgccgcgattatcagagaactcgaaaat
ctaccagaaatcgacgatgccgatttgaatcgcttggaagaacgtctcattgctgccgag
aaagaaattaaagccgtaaatctggatcagcgaatccgtgcgttgacggaagcgaagatt
ctacaaacgcaatgggttaaaaattatgaggatgaagtcaacagattgcgaatcgaagta
gagaatatcgatgatattcgaaaggctttaccaacagattgttatcagcgcgttcgtctg
gagccttga
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