Solenopsis invicta (red fire ant): 105193343
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Entry
105193343 CDS
T03916
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
soc
Solenopsis invicta (red fire ant)
Pathway
soc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
soc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105193343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soc03019
]
105193343
Messenger RNA biogenesis [BR:
soc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105193343
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
105193343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
105193343
NCBI-ProteinID:
XP_011156055
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Position
5:complement(15055779..15057201)
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AA seq
272 aa
AA seq
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MEPNQEDDHGGLRVDGRRALELRQIRMRMGVFGQADGSAYIEQGNTKVLTAVYGPRQPKS
SSAKSSTKAIINCQYSMAVFSFTSGERKRRPRGDWKSQERSAQLRHAMEAIIHLELYPRS
QIDVFVEVLQVDGSDYCVSVNAATLALIDAGIPIKNYAIGCTVTLINKPSTEDEDKTLAM
GVLDANYVEECSPGVTLSVVALLETNNEIDVNGNGLIVVAHGAGQRLHLSRLEALKQRAL
QGCQDIKNILDRGVRHHLTANMLPSFMHNSLD
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atggagccgaatcaggaggatgatcacggtggattacgcgttgacggtagacgagcgtta
gagttgaggcagatccgtatgcggatgggagtgttcggacaggctgacgggagtgcgtac
atagaacaaggcaacacaaaggttttaaccgcggtgtacggtcctcgtcagccaaaaagc
agctcagcgaagagcagtacaaaggctatcataaattgccagtacagtatggctgtattt
agttttacttctggcgaacggaagcgaagacccagaggagactggaagtcgcaggagaga
tcagcgcaattgcgccatgcaatggaggccataatacacttagagctctatccacgttct
caaattgacgtttttgtagaggttctacaagttgatggcagtgattattgtgtatctgtg
aacgctgcaacactcgcgttaatagatgctggaattccaatcaagaattatgccattggg
tgtaccgtgactctcattaataaaccatcgacagaagacgaagataaaacattagcgatg
ggagtactagacgcgaattatgtagaggagtgctctccaggagttactttgtctgttgtc
gcattgctagaaacgaataatgagattgatgtaaatggaaatggtttgatagtagtagca
cacggagcaggacagagattacatttgtcacgtttagaagcactcaagcaacgcgcatta
caaggttgccaggacataaagaatatattggatcgtggtgtgaggcatcatctaactgcg
aatatgctgccttctttcatgcataattcactcgattag
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